RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 SLC7A5P1Q8MH63 180 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 CLRN3Q8NCR9 226 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 ATP6V0E2Q8NHE4 81 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 RPL36ALQ969Q0 106 aaKnown RBP7.53□□□□□ -1.2
CAPN1-218ENST00000530442 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 FAT2Q9NYQ8 4349 aa7.53□□□□□ -1.2
CAPN1-218ENST00000530442 DNAH17Q9UFH2 4485 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 IGLV2-18A0A075B6J9 118 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 C7orf77A4D0Y5 90 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 H7C1H1 209 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 APOC3P02656 99 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 CAMPP49913 170 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 HBBP68871 147 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 RHEBQ15382 184 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 RASL11AQ6T310 242 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 ATP5L2Q7Z4Y8 100 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 AMN1Q8IY45 258 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 CTDSP1Q9GZU7 261 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 GTSF1LQ9H1H1 148 aa7.52□□□□□ -1.21
CAPN1-218ENST00000530442 IGHV3-38A0A0C4DH36 116 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 A0A1B0GW15 77 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 GAS8-AS1O95177 125 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 RAB4AP20338 218 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 WFDC10BQ8IUB3 73 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 RPL39LQ96EH5 51 aaKnown RBP7.51□□□□□ -1.21
CAPN1-218ENST00000530442 IMMP2LQ96T52 175 aa7.51□□□□□ -1.21
CAPN1-218ENST00000530442 A0A087WWC5 75 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 NDUFA5Q16718 116 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 LELP1Q5T871 98 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 SVBPQ8N300 66 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 DNAJC30Q96LL9 226 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 Q9H8V8 135 aa7.5□□□□□ -1.21
CAPN1-218ENST00000530442 M0R2N4 97 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 NCR2O95944 276 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 S100A8P05109 93 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 RPS10P46783 165 aaKnown RBP7.49□□□□□ -1.21
CAPN1-218ENST00000530442 FAM104BQ5XKR9 115 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 Q6ZR54 194 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 MRAP2Q96G30 205 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 BTF3L4Q96K17 158 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 KRTAP1-5Q9BYS1 174 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 RPS10P5Q9NQ39 176 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 NIT2Q9NQR4 276 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 TMEM242Q9NWH2 141 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 TNFRSF18Q9Y5U5 241 aa7.49□□□□□ -1.21
CAPN1-218ENST00000530442 NBDYA0A0U1RRE5 68 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 SMKR1H3BMG3 65 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 SIVA1O15304 175 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 SNAPINO95295 136 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 MRPL51Q4U2R6 128 aaKnown RBP7.48□□□□□ -1.21
CAPN1-218ENST00000530442 OR10J3Q5JRS4 329 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 KCNIP4Q6PIL6 250 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 DAZ4Q86SG3 579 aaKnown RBP7.48□□□□□ -1.21
CAPN1-218ENST00000530442 FRZBQ92765 325 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 DAZ3Q9NR90 486 aaKnown RBP7.48□□□□□ -1.21
CAPN1-218ENST00000530442 URGCP-MRPS24S4R325 110 aa7.48□□□□□ -1.21
CAPN1-218ENST00000530442 TRAV9-1A0A075B6T8 112 aa7.47□□□□□ -1.21
CAPN1-218ENST00000530442 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
CAPN1-218ENST00000530442 DNAH10OSP0CZ25 163 aa7.47□□□□□ -1.21
CAPN1-218ENST00000530442 NTM-AS1Q6ZSK4 140 aa7.47□□□□□ -1.21
CAPN1-218ENST00000530442 NRACQ8N912 160 aa7.47□□□□□ -1.21
CAPN1-218ENST00000530442 HECTD4Q9Y4D8 3996 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 TRBV6-8A0A0A6YYG3 113 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 TRAV8-6A0A0B4J262 113 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 S100PP25815 95 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 LINC01556Q5JQF7 62 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 ATRAIDQ6UW56 229 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 Q8N3U1 123 aa7.46□□□□□ -1.22
CAPN1-218ENST00000530442 DNAH11Q96DT5 4516 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 D6R8Y8 96 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
CAPN1-218ENST00000530442 DEFB104AQ8WTQ1 72 aa7.45□□□□□ -1.22
CAPN1-218ENST00000530442 EPPK1P58107 5090 aaKnown RBP7.44□□□□□ -1.22
CAPN1-218ENST00000530442 CKS2P33552 79 aa7.44□□□□□ -1.22
CAPN1-218ENST00000530442 IQCJQ1A5X6 159 aa7.44□□□□□ -1.22
CAPN1-218ENST00000530442 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
CAPN1-218ENST00000530442 NIT1Q86X76 327 aa7.44□□□□□ -1.22
CAPN1-218ENST00000530442 TMEM70Q9BUB7 260 aa7.44□□□□□ -1.22
CAPN1-218ENST00000530442 TRBV25-1A0A075B6N4 114 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 IGHV1-24A0A0C4DH33 117 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 NPYP01303 97 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 IGHV3-30P01768 117 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 IGHV3-33P01772 117 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 IGHV3-30-3P0DP02 117 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 IGHV3-30-5P0DP03 117 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
CAPN1-218ENST00000530442 COTL1Q14019 142 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 ELOBQ15370 118 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 ST20Q9HBF5 79 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 PKD1P98161 4303 aa7.43□□□□□ -1.22
CAPN1-218ENST00000530442 TRBV24-1A0A075B6N3 115 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 PPP1R17O96001 155 aa7.42□□□□□ -1.22
CAPN1-218ENST00000530442 TSHBP01222 138 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms