RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 DERL1Q9BUN8 251 aa10.36□□□□□ -0.75
COL16A1-216ENST00000529928 MANBALQ9NQG1 85 aa10.36□□□□□ -0.75
COL16A1-216ENST00000529928 TRBV10-1A0A0K0K1A3 114 aa10.35□□□□□ -0.75
COL16A1-216ENST00000529928 USP17L23D6RBM5 183 aa10.35□□□□□ -0.75
COL16A1-216ENST00000529928 RPL35P42766 123 aaKnown RBP10.35□□□□□ -0.75
COL16A1-216ENST00000529928 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
COL16A1-216ENST00000529928 AKAP14Q86UN6 197 aa10.35□□□□□ -0.75
COL16A1-216ENST00000529928 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
COL16A1-216ENST00000529928 hCG_2014768A0A024R1R8 64 aa10.34□□□□□ -0.75
COL16A1-216ENST00000529928 TMSB15BA0A087X1C1 80 aa10.34□□□□□ -0.75
COL16A1-216ENST00000529928 TMEM262E9PQX1 116 aa10.34□□□□□ -0.75
COL16A1-216ENST00000529928 RPL36AP83881 106 aaKnown RBP10.34□□□□□ -0.75
COL16A1-216ENST00000529928 BAGE2Q86Y30 109 aa10.34□□□□□ -0.75
COL16A1-216ENST00000529928 C9orf163Q8N9P6 203 aa10.34□□□□□ -0.75
COL16A1-216ENST00000529928 RPL36ALQ969Q0 106 aaKnown RBP10.34□□□□□ -0.75
COL16A1-216ENST00000529928 TRBV7-3A0A075B6L6 115 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 A0A087WWL8 130 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 HLA-DQA1P01909 254 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 UBE2D3P61077 147 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 UBE2D2P62837 147 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
COL16A1-216ENST00000529928 C15orf54Q8N8G6 183 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 SFRP2Q96HF1 295 aa10.33□□□□□ -0.76
COL16A1-216ENST00000529928 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.33□□□□□ -0.76
COL16A1-216ENST00000529928 TRBV6-8A0A0A6YYG3 113 aa10.32□□□□□ -0.76
COL16A1-216ENST00000529928 PRSS1P07477 247 aa10.32□□□□□ -0.76
COL16A1-216ENST00000529928 CXCL1P09341 107 aa10.32□□□□□ -0.76
COL16A1-216ENST00000529928 MIAQ16674 131 aa10.32□□□□□ -0.76
COL16A1-216ENST00000529928 PHLDA3Q9Y5J5 127 aa10.32□□□□□ -0.76
COL16A1-216ENST00000529928 ANGP03950 147 aaKnown RBP10.31□□□□□ -0.76
COL16A1-216ENST00000529928 MEF2BQ02080 365 aaPredicted RBP10.31□□□□□ -0.76
COL16A1-216ENST00000529928 MPV17L2Q567V2 206 aa10.31□□□□□ -0.76
COL16A1-216ENST00000529928 SSBP4Q9BWG4 385 aaPredicted RBP10.31□□□□□ -0.76
COL16A1-216ENST00000529928 A0A1B0GVG6 124 aa10.3□□□□□ -0.76
COL16A1-216ENST00000529928 PKIAP61925 76 aa10.3□□□□□ -0.76
COL16A1-216ENST00000529928 TRBV20OR9-2A0A075B6H5 130 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 TEX46H3BTG2 121 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 PANO1I0J062 215 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 M0R381 172 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 SNAI2O43623 268 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 BCL2P10415 239 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 PRR27Q6MZM9 219 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 ZFP82Q8N141 532 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 OR10G8Q8NGN5 311 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 OR10AG1Q8NH19 301 aa10.29□□□□□ -0.76
COL16A1-216ENST00000529928 PKHD1L1Q86WI1 4243 aa10.28□□□□□ -0.76
COL16A1-216ENST00000529928 RAB19A4D1S5 217 aa10.28□□□□□ -0.76
COL16A1-216ENST00000529928 PDE6DO43924 150 aa10.28□□□□□ -0.76
COL16A1-216ENST00000529928 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
COL16A1-216ENST00000529928 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.28□□□□□ -0.76
COL16A1-216ENST00000529928 C19orf71A6NCJ1 209 aa10.27□□□□□ -0.77
COL16A1-216ENST00000529928 OR5AL1P0C617 328 aa10.27□□□□□ -0.77
COL16A1-216ENST00000529928 LYPD6BQ8NI32 183 aa10.27□□□□□ -0.77
COL16A1-216ENST00000529928 CHCHD5Q9BSY4 110 aa10.27□□□□□ -0.77
COL16A1-216ENST00000529928 IFNA1P01562 189 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 CIRBPQ14011 172 aaKnown RBP10.26□□□□□ -0.77
COL16A1-216ENST00000529928 ALKAL2Q6UX46 152 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 CLRN3Q8NCR9 226 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 SMIM12Q96EX1 92 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 PRR34Q9NV39 138 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
COL16A1-216ENST00000529928 IGLC6P0CF74 106 aa10.25□□□□□ -0.77
COL16A1-216ENST00000529928 GNG4P50150 75 aa10.25□□□□□ -0.77
COL16A1-216ENST00000529928 RAB4BP61018 213 aa10.25□□□□□ -0.77
COL16A1-216ENST00000529928 NEXN-AS1Q8NBZ9 246 aa10.25□□□□□ -0.77
COL16A1-216ENST00000529928 MED9Q9NWA0 146 aa10.25□□□□□ -0.77
COL16A1-216ENST00000529928 MUC21A0A0G2JKD1 596 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 MUC21A0A140T8X8 626 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 NKX2-5P52952 324 aaPredicted RBP10.24□□□□□ -0.77
COL16A1-216ENST00000529928 CNBPP62633 177 aaKnown RBP10.24□□□□□ -0.77
COL16A1-216ENST00000529928 KRTAP26-1Q6PEX3 210 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 RNF185Q96GF1 192 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 DPH3P1Q9H4G8 78 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 KIF25-AS1Q9Y6Z4 181 aa10.24□□□□□ -0.77
COL16A1-216ENST00000529928 GZMBP10144 247 aa10.23□□□□□ -0.77
COL16A1-216ENST00000529928 TAGLN2P37802 199 aaKnown RBP10.23□□□□□ -0.77
COL16A1-216ENST00000529928 ZNF56Q15929 161 aa10.23□□□□□ -0.77
COL16A1-216ENST00000529928 TMEM97Q5BJF2 176 aa10.23□□□□□ -0.77
COL16A1-216ENST00000529928 CLPSL2Q6UWE3 100 aa10.23□□□□□ -0.77
COL16A1-216ENST00000529928 DPH3Q96FX2 82 aa10.23□□□□□ -0.77
COL16A1-216ENST00000529928 LINC00269Q8N2A0 174 aa10.22□□□□□ -0.77
COL16A1-216ENST00000529928 IGHV3-64A0A075B6Q5 118 aa10.21□□□□□ -0.77
COL16A1-216ENST00000529928 K7EN84 100 aa10.21□□□□□ -0.77
COL16A1-216ENST00000529928 RBX1P62877 108 aa10.21□□□□□ -0.77
COL16A1-216ENST00000529928 BLOC1S1P78537 153 aa10.21□□□□□ -0.77
COL16A1-216ENST00000529928 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
COL16A1-216ENST00000529928 A0A087WYN8 130 aa10.2□□□□□ -0.78
COL16A1-216ENST00000529928 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.2□□□□□ -0.78
COL16A1-216ENST00000529928 hDV102S1A0JD36 115 aa10.2□□□□□ -0.78
COL16A1-216ENST00000529928 SPANXN1Q5VSR9 72 aa10.2□□□□□ -0.78
COL16A1-216ENST00000529928 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
COL16A1-216ENST00000529928 TRBV25-1A0A075B6N4 114 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 P01737 135 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 RPS20P60866 119 aaKnown RBP10.19□□□□□ -0.78
COL16A1-216ENST00000529928 GAGE6Q13070 117 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 FER1L6-AS1Q8NA97 138 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 NUDT10Q8NFP7 164 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 OCC1Q8TAD7 63 aa10.19□□□□□ -0.78
COL16A1-216ENST00000529928 SPACA4Q8TDM5 124 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms