RNA–Protein interactions for RNA: ENST00000528762.1

BRCA2-203, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 4

Gene BRCA2, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-203ENST00000528762 UBE2D1P51668 147 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 RPRMQ9NS64 109 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 KDM6BO15054 1643 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 FRAS1Q86XX4 4008 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 NOTCH1P46531 2555 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 APCP25054 2843 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 A2ML1A8K2U0 1454 aa0.73□□□□□ -2.29
BRCA2-203ENST00000528762 SNCGO76070 127 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 IFNA17P01571 189 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 FAM74A4Q5TZK3 123 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 C20orf197Q8N268 126 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 COPS9Q8WXC6 57 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 NAA60Q9H7X0 242 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 DOCK2Q92608 1830 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 IFT140Q96RY7 1462 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 WDR7Q9Y4E6 1490 aa0.72□□□□□ -2.29
BRCA2-203ENST00000528762 EIF4G3O43432 1585 aaKnown RBP0.71□□□□□ -2.3
BRCA2-203ENST00000528762 CADP27708 2225 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 A6NIN4 97 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 MCRIP1C9JLW8 97 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 SSBP1Q04837 148 aaKnown RBP0.71□□□□□ -2.3
BRCA2-203ENST00000528762 S100A7L2Q5SY68 101 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 Q96NJ1 140 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 NAIPQ13075 1403 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 LRRC37A3O60309 1634 aa0.71□□□□□ -2.3
BRCA2-203ENST00000528762 CORTO00230 105 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 AKAIN1P0CW23 69 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 CCL8P80075 99 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 Q56UQ5 140 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 SPATA8Q6RVD6 105 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 ZNF818PQ6ZRF7 136 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 COX7B2Q8TF08 81 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 TCHHQ07283 1943 aa0.7□□□□□ -2.3
BRCA2-203ENST00000528762 KCPQ6ZWJ8 1503 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 RIMS1Q86UR5 1692 aaKnown RBP0.69□□□□□ -2.3
BRCA2-203ENST00000528762 ROBO1Q9Y6N7 1651 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 F2Z2F3 143 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 TNFP01375 233 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 IFNGP01579 166 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 INSL4Q14641 139 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 C4orf33Q8N1A6 199 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 SPTSSBQ8NFR3 76 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 BDP1A6H8Y1 2624 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 SMG6Q86US8 1419 aaKnown RBP0.69□□□□□ -2.3
BRCA2-203ENST00000528762 LAMC3Q9Y6N6 1575 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 PRDM2Q13029 1718 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 CACNA1HO95180 2353 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 CDK13Q14004 1512 aaKnown RBP0.69□□□□□ -2.3
BRCA2-203ENST00000528762 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
BRCA2-203ENST00000528762 TRBV10-3A0A0K0K1G6 114 aa0.68□□□□□ -2.3
BRCA2-203ENST00000528762 SIX6O95475 246 aa0.68□□□□□ -2.3
BRCA2-203ENST00000528762 C12orf73Q69YU5 71 aa0.68□□□□□ -2.3
BRCA2-203ENST00000528762 FAM103A1Q9BTL3 118 aaKnown RBP0.68□□□□□ -2.3
BRCA2-203ENST00000528762 ARAP2Q8WZ64 1704 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 CASKIN1Q8WXD9 1431 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 TRBV7-1A0A0A6YYK4 115 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 HCG22E2RYF7 251 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 F6UZH7 168 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 RBM3P98179 157 aaKnown RBP0.67□□□□□ -2.3
BRCA2-203ENST00000528762 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 KRTAP19-3Q7Z4W3 81 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 BPESC1Q9GZL8 116 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 IER3IP1Q9Y5U9 82 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 LINC00312Q9Y6C7 94 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 V9GYV3 84 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 IFT172Q9UG01 1749 aa0.67□□□□□ -2.3
BRCA2-203ENST00000528762 SSC5DA1L4H1 1573 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 OOSP1A8MZH6 123 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 APOC4-APOC2K7ER74 178 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 EDDM3BP56851 147 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 SPINK7P58062 85 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 MYOM2P54296 1465 aa0.66□□□□□ -2.3
BRCA2-203ENST00000528762 ASXL3Q9C0F0 2248 aa0.65□□□□□ -2.3
BRCA2-203ENST00000528762 SHROOM2Q13796 1616 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 PIGBOS1A0A0B4J2F0 54 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 APOC2P02655 101 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 CATR1Q13166 79 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 CGREF1Q99674 301 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 WFDC6Q9BQY6 131 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 PRR15LQ9BU68 103 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 PXDNQ92626 1479 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 UNC13BO14795 1591 aa0.65□□□□□ -2.31
BRCA2-203ENST00000528762 PSME4Q14997 1843 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 GVQW2A0A096LPI5 108 aaPredicted RBP0.64□□□□□ -2.31
BRCA2-203ENST00000528762 TRAV13-2A0A0B4J235 113 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 MIF4GDA9UHW6 222 aaKnown RBP0.64□□□□□ -2.31
BRCA2-203ENST00000528762 SMIM11BQ8TCY0 68 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 PPP3R2Q96LZ3 170 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 SPANXDQ9BXN6 97 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 PLAC8Q9NZF1 115 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 SCP2D1Q9UJQ7 156 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 GNG8Q9UK08 70 aa0.64□□□□□ -2.31
BRCA2-203ENST00000528762 ACYP2P14621 99 aa0.63□□□□□ -2.31
BRCA2-203ENST00000528762 C5orf38Q86SI9 138 aa0.63□□□□□ -2.31
BRCA2-203ENST00000528762 ANK2Q01484 3957 aa0.63□□□□□ -2.31
BRCA2-203ENST00000528762 ZMYM4Q5VZL5 1548 aa0.63□□□□□ -2.31
BRCA2-203ENST00000528762 FAM135AQ9P2D6 1515 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms