RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 OR2D3Q8NGH3 330 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 UBE2WQ96B02 151 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 TMEM70Q9BUB7 260 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 MED9Q9NWA0 146 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 URGCP-MRPS24S4R325 110 aa6.86□□□□□ -1.31
PRPF40B-204ENST00000527253 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 IGKV2D-24A0A075B6R9 120 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 A0A087WX48 190 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 INAFM2P0DMQ5 153 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 GNG4P50150 75 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 MPV17L2Q567V2 206 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 FER1L6-AS1Q8NA97 138 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 CHCHD7Q9BUK0 85 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 TPPP3Q9BW30 176 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 VAX2Q9UIW0 290 aa6.85□□□□□ -1.31
PRPF40B-204ENST00000527253 SRRM2Q9UQ35 2752 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 M0QY20 66 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 PDE6DO43924 150 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 RPS20P60866 119 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 SUMO4Q6EEV6 95 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 Q6ZSA8 131 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 Q8N976 141 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 NUDT10Q8NFP7 164 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 FRZBQ92765 325 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 DAZAP1Q96EP5 407 aaKnown RBP6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 SMIM12Q96EX1 92 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 NUDT11Q96G61 164 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 AP1S3Q96PC3 154 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
PRPF40B-204ENST00000527253 VPS13BQ7Z7G8 4022 aa6.84□□□□□ -1.32
PRPF40B-204ENST00000527253 hCG_2014768A0A024R1R8 64 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 TEX46H3BTG2 121 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 K7EN84 100 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 IFNA1P01562 189 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 MGPP08493 103 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 ELOBQ15370 118 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 C15orf54Q8N8G6 183 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 OCC1Q8TAD7 63 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 RMI2Q96E14 147 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 CHCHD5Q9BSY4 110 aa6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 DMBT1Q9UGM3 2413 aaPredicted RBP6.83□□□□□ -1.32
PRPF40B-204ENST00000527253 HERC1Q15751 4861 aa6.82□□□□□ -1.32
PRPF40B-204ENST00000527253 P01737 135 aa6.82□□□□□ -1.32
PRPF40B-204ENST00000527253 SMIM17P0DL12 118 aa6.82□□□□□ -1.32
PRPF40B-204ENST00000527253 CACNG7P62955 275 aa6.82□□□□□ -1.32
PRPF40B-204ENST00000527253 AKAP14Q86UN6 197 aa6.82□□□□□ -1.32
PRPF40B-204ENST00000527253 F2Z2F3 143 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 ANGP03950 147 aaKnown RBP6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 NTF3P20783 257 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 RBX1P62877 108 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 Q0VG73 95 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 GAGE6Q13070 117 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 KRTAP26-1Q6PEX3 210 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 KCNIP4Q6PIL6 250 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 ALKAL2Q6UX46 152 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 DEFB104AQ8WTQ1 72 aa6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 RNASE7Q9H1E1 156 aaKnown RBP6.81□□□□□ -1.32
PRPF40B-204ENST00000527253 CTRLP40313 264 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 NKX2-5P52952 324 aaPredicted RBP6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 IQCJQ1A5X6 159 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 WDR73Q6P4I2 378 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 LYPD6BQ8NI32 183 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 C1orf43Q9BWL3 253 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 PRR34Q9NV39 138 aa6.8□□□□□ -1.32
PRPF40B-204ENST00000527253 XKRY2A2RUG3 117 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 FAM229AH3BQW9 127 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 TAGLN2P37802 199 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 FOXA3P55318 350 aaPredicted RBP6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 TMEM97Q5BJF2 176 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 RASL11AQ6T310 242 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 CLPSL2Q6UWE3 100 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 LINC00269Q8N2A0 174 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 GTSF1Q8WW33 167 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 CNFNQ9BYD5 112 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 DPH3P1Q9H4G8 78 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 RPP21Q9H633 154 aaKnown RBP6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 BIN3Q9NQY0 253 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 MYCBP2O75592 4640 aa6.79□□□□□ -1.32
PRPF40B-204ENST00000527253 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 IGHV1-24A0A0C4DH33 117 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 USP17L23D6RBM5 183 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 H7C1H1 209 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 CRPP02741 224 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 TRGC1P0CF51 173 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 SCXQ7RTU7 201 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 C20orf203Q8NBC4 194 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 NIT2Q9NQR4 276 aa6.78□□□□□ -1.32
PRPF40B-204ENST00000527253 IGLV4-60A0A075B6I1 120 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 TRAV26-2A0A0B4J265 109 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 A0A1B0GVG6 124 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 TMEM250H0YL14 139 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 PRSS1P07477 247 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 PKIAP61925 76 aa6.77□□□□□ -1.33
PRPF40B-204ENST00000527253 BLOC1S1P78537 153 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms