RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 NUDT10Q8NFP7 164 aa8.92□□□□□ -0.98
USH1C-203ENST00000526181 NUDT11Q96G61 164 aa8.92□□□□□ -0.98
USH1C-203ENST00000526181 RNASE7Q9H1E1 156 aaKnown RBP8.92□□□□□ -0.98
USH1C-203ENST00000526181 KLK12Q9UKR0 248 aa8.92□□□□□ -0.98
USH1C-203ENST00000526181 URGCP-MRPS24S4R325 110 aa8.92□□□□□ -0.98
USH1C-203ENST00000526181 IGLV5-52A0A0A0MRZ9 124 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 TRAV8-3A0A0A6YYJ7 113 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 LECT2O14960 151 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 GCSHP23434 173 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 XGP55808 180 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 BLOC1S1P78537 153 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 OCC1Q8TAD7 63 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 TM2D2Q9BX73 214 aa8.91□□□□□ -0.98
USH1C-203ENST00000526181 A0A087WX48 190 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 XKRY2A2RUG3 117 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 CACNG7P62955 275 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 TOR2AQ5JU69 321 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 SUMO4Q6EEV6 95 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 LYPD6BQ8NI32 183 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 RPP21Q9H633 154 aaKnown RBP8.9□□□□□ -0.98
USH1C-203ENST00000526181 BIN3Q9NQY0 253 aa8.9□□□□□ -0.98
USH1C-203ENST00000526181 TMEM262E9PQX1 116 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 F2Z2F3 143 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 M0QY20 66 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 NTF3P20783 257 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 HAMPP81172 84 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 MPV17L2Q567V2 206 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 UBE2WQ96B02 151 aa8.89□□□□□ -0.99
USH1C-203ENST00000526181 IGKV2D-24A0A075B6R9 120 aa8.88□□□□□ -0.99
USH1C-203ENST00000526181 CTRLP40313 264 aa8.88□□□□□ -0.99
USH1C-203ENST00000526181 CEBPGP53567 150 aa8.88□□□□□ -0.99
USH1C-203ENST00000526181 NTN5Q8WTR8 489 aaPredicted RBP8.88□□□□□ -0.99
USH1C-203ENST00000526181 CHCHD5Q9BSY4 110 aa8.88□□□□□ -0.99
USH1C-203ENST00000526181 CHCHD7Q9BUK0 85 aa8.88□□□□□ -0.99
USH1C-203ENST00000526181 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 KCNIP4Q6PIL6 250 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 ENHOQ6UWT2 76 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 C15orf54Q8N8G6 183 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 Q8N976 141 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 GTSF1Q8WW33 167 aa8.87□□□□□ -0.99
USH1C-203ENST00000526181 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.86□□□□□ -0.99
USH1C-203ENST00000526181 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
USH1C-203ENST00000526181 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.86□□□□□ -0.99
USH1C-203ENST00000526181 DEFB104AQ8WTQ1 72 aa8.86□□□□□ -0.99
USH1C-203ENST00000526181 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
USH1C-203ENST00000526181 H7C1H1 209 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 ANGP03950 147 aaKnown RBP8.85□□□□□ -0.99
USH1C-203ENST00000526181 GAGE6Q13070 117 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 ELOBQ15370 118 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 TWIST1Q15672 202 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 RASL11AQ6T310 242 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 RMI2Q96E14 147 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 CNFNQ9BYD5 112 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 EIF5A2Q9GZV4 153 aaKnown RBP8.85□□□□□ -0.99
USH1C-203ENST00000526181 COX11Q9Y6N1 276 aa8.85□□□□□ -0.99
USH1C-203ENST00000526181 TRAV26-2A0A0B4J265 109 aa8.84□□□□□ -0.99
USH1C-203ENST00000526181 GATCO43716 136 aaKnown RBP8.84□□□□□ -0.99
USH1C-203ENST00000526181 FOXA3P55318 350 aaPredicted RBP8.84□□□□□ -0.99
USH1C-203ENST00000526181 FAM210AQ96ND0 272 aa8.84□□□□□ -0.99
USH1C-203ENST00000526181 FAM30AQ9NZY2 134 aa8.84□□□□□ -0.99
USH1C-203ENST00000526181 TRBV25-1A0A075B6N4 114 aa8.83□□□□□ -1
USH1C-203ENST00000526181 CRPP02741 224 aa8.83□□□□□ -1
USH1C-203ENST00000526181 SMR3BP02814 79 aaPredicted RBP8.83□□□□□ -1
USH1C-203ENST00000526181 RBX1P62877 108 aa8.83□□□□□ -1
USH1C-203ENST00000526181 Q0VG73 95 aa8.83□□□□□ -1
USH1C-203ENST00000526181 IQCJQ1A5X6 159 aa8.83□□□□□ -1
USH1C-203ENST00000526181 LINC01620Q4KN68 170 aa8.83□□□□□ -1
USH1C-203ENST00000526181 TMEM97Q5BJF2 176 aa8.83□□□□□ -1
USH1C-203ENST00000526181 WDR73Q6P4I2 378 aa8.83□□□□□ -1
USH1C-203ENST00000526181 CLPSL2Q6UWE3 100 aa8.83□□□□□ -1
USH1C-203ENST00000526181 FAM231DQ6ZW35 169 aa8.83□□□□□ -1
USH1C-203ENST00000526181 SMIM7Q9BQ49 75 aa8.83□□□□□ -1
USH1C-203ENST00000526181 IGHV1-24A0A0C4DH33 117 aa8.82□□□□□ -1
USH1C-203ENST00000526181 EPM2AB3EWF7 344 aa8.82□□□□□ -1
USH1C-203ENST00000526181 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
USH1C-203ENST00000526181 LINC01551Q86U37 167 aa8.82□□□□□ -1
USH1C-203ENST00000526181 PGLYRP4Q96LB8 373 aa8.82□□□□□ -1
USH1C-203ENST00000526181 TMEM70Q9BUB7 260 aa8.82□□□□□ -1
USH1C-203ENST00000526181 C1orf43Q9BWL3 253 aa8.82□□□□□ -1
USH1C-203ENST00000526181 NIT2Q9NQR4 276 aa8.82□□□□□ -1
USH1C-203ENST00000526181 Q5VSD8 79 aa8.81□□□□□ -1
USH1C-203ENST00000526181 LINC00269Q8N2A0 174 aa8.81□□□□□ -1
USH1C-203ENST00000526181 GATD1Q8NB37 220 aa8.81□□□□□ -1
USH1C-203ENST00000526181 ZNF727A8MUV8 499 aa8.8□□□□□ -1
USH1C-203ENST00000526181 A8MWL6 223 aa8.8□□□□□ -1
USH1C-203ENST00000526181 HLA-DQA1P01909 254 aa8.8□□□□□ -1
USH1C-203ENST00000526181 PKIAP61925 76 aa8.8□□□□□ -1
USH1C-203ENST00000526181 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
USH1C-203ENST00000526181 PRR34Q9NV39 138 aa8.8□□□□□ -1
USH1C-203ENST00000526181 C9JQL5 133 aa8.79□□□□□ -1
USH1C-203ENST00000526181 IFITM2Q01629 132 aa8.79□□□□□ -1
USH1C-203ENST00000526181 CT83Q5H943 113 aa8.79□□□□□ -1
USH1C-203ENST00000526181 TMEM243Q9BU79 118 aa8.79□□□□□ -1
USH1C-203ENST00000526181 IGLV4-60A0A075B6I1 120 aa8.78□□□□□ -1
USH1C-203ENST00000526181 NDUFS6O75380 124 aaKnown RBP8.78□□□□□ -1
USH1C-203ENST00000526181 SRSF3P84103 164 aaKnown RBP8.78□□□□□ -1
USH1C-203ENST00000526181 MIAQ16674 131 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms