RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 PEA15Q15121 130 aa12.32□□□□□ -0.44
TSPAN4-216ENST00000526055 ELOBQ15370 118 aa12.32□□□□□ -0.44
TSPAN4-216ENST00000526055 TMEM97Q5BJF2 176 aa12.32□□□□□ -0.44
TSPAN4-216ENST00000526055 DNAH5Q8TE73 4624 aa12.32□□□□□ -0.44
TSPAN4-216ENST00000526055 GZMBP10144 247 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 CEBPGP53567 150 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 WDR73Q6P4I2 378 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 KCNIP4Q6PIL6 250 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 DAZ4Q86SG3 579 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 RMI2Q96E14 147 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 TPPP3Q9BW30 176 aa12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 DAZ3Q9NR90 486 aaKnown RBP12.31□□□□□ -0.44
TSPAN4-216ENST00000526055 A0A087WX48 190 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 TRBV6-8A0A0A6YYG3 113 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 SRP19P09132 144 aaKnown RBP12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 PKIAP61925 76 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 Q8N3U1 123 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 NUDT10Q8NFP7 164 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 NUDT11Q96G61 164 aa12.3□□□□□ -0.44
TSPAN4-216ENST00000526055 H7C1H1 209 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 TRGC1P0CF51 173 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 SSTP61278 116 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 CLLU1Q5K131 121 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 MAPKAPK5-AS1Q8N8E1 139 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 DNAJC30Q96LL9 226 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
TSPAN4-216ENST00000526055 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
TSPAN4-216ENST00000526055 Q8N814 137 aa12.28□□□□□ -0.44
TSPAN4-216ENST00000526055 OCC1Q8TAD7 63 aa12.28□□□□□ -0.44
TSPAN4-216ENST00000526055 ZNF727A8MUV8 499 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 GCSHP23434 173 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 CTRLP40313 264 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 IFITM2Q01629 132 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 LYZL1Q6UWQ5 148 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 Q8N1X5 172 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 CNFNQ9BYD5 112 aa12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 RPP21Q9H633 154 aaKnown RBP12.27□□□□□ -0.45
TSPAN4-216ENST00000526055 APOBP04114 4563 aaKnown RBP12.26□□□□□ -0.45
TSPAN4-216ENST00000526055 IGLV5-52A0A0A0MRZ9 124 aa12.26□□□□□ -0.45
TSPAN4-216ENST00000526055 K7EN84 100 aa12.26□□□□□ -0.45
TSPAN4-216ENST00000526055 M0QY20 66 aa12.26□□□□□ -0.45
TSPAN4-216ENST00000526055 Q0VG73 95 aa12.26□□□□□ -0.45
TSPAN4-216ENST00000526055 MGPP08493 103 aa12.25□□□□□ -0.45
TSPAN4-216ENST00000526055 NTF3P20783 257 aa12.25□□□□□ -0.45
TSPAN4-216ENST00000526055 FUSP35637 526 aaKnown RBP eCLIP12.25□□□□□ -0.45
TSPAN4-216ENST00000526055 DPH3P1Q9H4G8 78 aa12.25□□□□□ -0.45
TSPAN4-216ENST00000526055 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
TSPAN4-216ENST00000526055 TMEM262E9PQX1 116 aa12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 KRTAP10-1P60331 282 aa12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 ATRAIDQ6UW56 229 aa12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 FAM231DQ6ZW35 169 aa12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 ABCA13Q86UQ4 5058 aa12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 RNASE7Q9H1E1 156 aaKnown RBP12.24□□□□□ -0.45
TSPAN4-216ENST00000526055 SUMO4Q6EEV6 95 aa12.23□□□□□ -0.45
TSPAN4-216ENST00000526055 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 SRSF3P84103 164 aaKnown RBP12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 TMEM241Q24JQ0 296 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 RASL11AQ6T310 242 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 FRZBQ92765 325 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 UBE2WQ96B02 151 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 CHCHD5Q9BSY4 110 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 KRTAP4-5Q9BYR2 181 aa12.22□□□□□ -0.45
TSPAN4-216ENST00000526055 C9JQL5 133 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 TWIST1Q15672 202 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 IQCJQ1A5X6 159 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 CT83Q5H943 113 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 NTM-AS1Q6ZSK4 140 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 LINC01551Q86U37 167 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 TMEM70Q9BUB7 260 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 NAT8Q9UHE5 227 aa12.21□□□□□ -0.45
TSPAN4-216ENST00000526055 IGKV2D-24A0A075B6R9 120 aa12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 A8MWL6 223 aa12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 GATCO43716 136 aaKnown RBP12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 XGP55808 180 aa12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 MPV17L2Q567V2 206 aa12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 NIT2Q9NQR4 276 aa12.2□□□□□ -0.46
TSPAN4-216ENST00000526055 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
TSPAN4-216ENST00000526055 CRPP02741 224 aa12.19□□□□□ -0.46
TSPAN4-216ENST00000526055 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
TSPAN4-216ENST00000526055 Q8N976 141 aa12.19□□□□□ -0.46
TSPAN4-216ENST00000526055 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
TSPAN4-216ENST00000526055 ANGP03950 147 aaKnown RBP12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 WFDC2Q14508 124 aa12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 C15orf54Q8N8G6 183 aa12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 GTSF1Q8WW33 167 aa12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 C1orf43Q9BWL3 253 aa12.18□□□□□ -0.46
TSPAN4-216ENST00000526055 MIAQ16674 131 aa12.17□□□□□ -0.46
TSPAN4-216ENST00000526055 UQCC3Q6UW78 93 aa12.17□□□□□ -0.46
TSPAN4-216ENST00000526055 ENHOQ6UWT2 76 aa12.17□□□□□ -0.46
TSPAN4-216ENST00000526055 BAALCQ8WXS3 180 aa12.17□□□□□ -0.46
TSPAN4-216ENST00000526055 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
TSPAN4-216ENST00000526055 RPL23P62829 140 aaKnown RBP12.16□□□□□ -0.46
TSPAN4-216ENST00000526055 RBX1P62877 108 aa12.16□□□□□ -0.46
TSPAN4-216ENST00000526055 ADIRFQ15847 76 aa12.16□□□□□ -0.46
TSPAN4-216ENST00000526055 PRR34Q9NV39 138 aa12.16□□□□□ -0.46
TSPAN4-216ENST00000526055 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
TSPAN4-216ENST00000526055 C14orf177Q52M58 125 aa12.15□□□□□ -0.46
TSPAN4-216ENST00000526055 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
TSPAN4-216ENST00000526055 GFRA4Q9GZZ7 299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms