RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 ADIRFQ15847 76 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 UQCC3Q6UW78 93 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 C14orf178Q8N769 122 aaPredicted RBP8.51□□□□□ -1.05
SMCO4-202ENST00000525141 TSKUQ8WUA8 353 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
SMCO4-202ENST00000525141 TRBV10-1A0A0K0K1A3 114 aa8.5□□□□□ -1.05
SMCO4-202ENST00000525141 TRGC1P0CF51 173 aa8.5□□□□□ -1.05
SMCO4-202ENST00000525141 OR10G8Q8NGN5 311 aa8.5□□□□□ -1.05
SMCO4-202ENST00000525141 V9GYV3 84 aa8.5□□□□□ -1.05
SMCO4-202ENST00000525141 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
SMCO4-202ENST00000525141 FUSP35637 526 aaKnown RBP eCLIP8.49□□□□□ -1.05
SMCO4-202ENST00000525141 TWIST1Q15672 202 aa8.49□□□□□ -1.05
SMCO4-202ENST00000525141 ATP6V0E2Q8NHE4 81 aa8.49□□□□□ -1.05
SMCO4-202ENST00000525141 Q9UF83 564 aa8.49□□□□□ -1.05
SMCO4-202ENST00000525141 HIGD1CA8MV81 97 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 F5H697 171 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 CDK2AP2O75956 126 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 EVI2AP22794 236 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 PNRC1Q12796 327 aaPredicted RBP8.48□□□□□ -1.05
SMCO4-202ENST00000525141 ZNF56Q15929 161 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 WFDC10BQ8IUB3 73 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 PGLYRP4Q96LB8 373 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 GTSF1LQ9H1H1 148 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 DPH3P1Q9H4G8 78 aa8.48□□□□□ -1.05
SMCO4-202ENST00000525141 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 A0A1B0GUT8 65 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 GAGE12JA6NER3 117 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
SMCO4-202ENST00000525141 GAGE1Q13065 139 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 GAGE4Q13068 117 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 GAGE5Q13069 117 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 GAGE13Q4V321 117 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
SMCO4-202ENST00000525141 BORCS7Q96B45 105 aa8.47□□□□□ -1.05
SMCO4-202ENST00000525141 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 TMEM218A2RU14 115 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 LINC00862A6NCI5 91 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 H7C1H1 209 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 XP32Q5T750 250 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 SMIM15Q7Z3B0 74 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 NAT8BQ9UHF3 227 aa8.46□□□□□ -1.06
SMCO4-202ENST00000525141 A0A087WWC5 75 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 K7EP13 123 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 M0QY20 66 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 UBE2D3P61077 147 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 UBE2D2P62837 147 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 LELP1Q5T871 98 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 DNAJC30Q96LL9 226 aa8.45□□□□□ -1.06
SMCO4-202ENST00000525141 TRAV8-6A0A0B4J262 113 aa8.44□□□□□ -1.06
SMCO4-202ENST00000525141 MGPP08493 103 aa8.44□□□□□ -1.06
SMCO4-202ENST00000525141 COMMD7Q86VX2 200 aa8.44□□□□□ -1.06
SMCO4-202ENST00000525141 FRZBQ92765 325 aa8.44□□□□□ -1.06
SMCO4-202ENST00000525141 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 MT-ND4LP03901 98 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 RIGQ13278 110 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 SUMO4Q6EEV6 95 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 RASL11AQ6T310 242 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.43□□□□□ -1.06
SMCO4-202ENST00000525141 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 SEC11CQ9BY50 192 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 TMEM191AQ9H0A3 160 aa8.43□□□□□ -1.06
SMCO4-202ENST00000525141 A0A087WTM6 91 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 IGHV3-38A0A0C4DH36 116 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 F8W036 122 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 DAZ4Q86SG3 579 aaKnown RBP8.42□□□□□ -1.06
SMCO4-202ENST00000525141 MAPKAPK5-AS1Q8N8E1 139 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
SMCO4-202ENST00000525141 DAZ3Q9NR90 486 aaKnown RBP8.42□□□□□ -1.06
SMCO4-202ENST00000525141 A0A1B0GW15 77 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 ADCYAP1P18509 176 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 XGP55808 180 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 TMEM97Q5BJF2 176 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 Q8N1X5 172 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 GATD1Q8NB37 220 aa8.41□□□□□ -1.06
SMCO4-202ENST00000525141 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
SMCO4-202ENST00000525141 C10orf91Q5T1B1 145 aa8.4□□□□□ -1.06
SMCO4-202ENST00000525141 NFE4Q86UQ8 179 aa8.4□□□□□ -1.06
SMCO4-202ENST00000525141 TRBV6-8A0A0A6YYG3 113 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 IBA57-AS1B1ANH7 110 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 RAB4AP20338 218 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 KRTAP10-1P60331 282 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 C10orf126Q8N4M7 172 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 FAT1Q14517 4588 aa8.39□□□□□ -1.07
SMCO4-202ENST00000525141 S100A8P05109 93 aa8.38□□□□□ -1.07
SMCO4-202ENST00000525141 Q8N3U1 123 aa8.38□□□□□ -1.07
SMCO4-202ENST00000525141 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
SMCO4-202ENST00000525141 CTDSP1Q9GZU7 261 aa8.38□□□□□ -1.07
SMCO4-202ENST00000525141 DNAH8Q96JB1 4490 aa8.38□□□□□ -1.07
SMCO4-202ENST00000525141 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
SMCO4-202ENST00000525141 KCNIP4Q6PIL6 250 aa8.37□□□□□ -1.07
SMCO4-202ENST00000525141 ATP5L2Q7Z4Y8 100 aa8.37□□□□□ -1.07
SMCO4-202ENST00000525141 MRAP2Q96G30 205 aa8.37□□□□□ -1.07
SMCO4-202ENST00000525141 IMMP2LQ96T52 175 aa8.37□□□□□ -1.07
SMCO4-202ENST00000525141 CARHSP1Q9Y2V2 147 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms