RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TOR2AQ5JU69 321 aa12.78□□□□□ -0.36
FBXO28-205ENST00000523990 LYZL1Q6UWQ5 148 aa12.78□□□□□ -0.36
FBXO28-205ENST00000523990 DNAH8Q96JB1 4490 aa12.77□□□□□ -0.37
FBXO28-205ENST00000523990 RPP21Q9H633 154 aaKnown RBP12.77□□□□□ -0.37
FBXO28-205ENST00000523990 URGCP-MRPS24S4R325 110 aa12.77□□□□□ -0.37
FBXO28-205ENST00000523990 ABCA13Q86UQ4 5058 aa12.77□□□□□ -0.37
FBXO28-205ENST00000523990 CHCHD7Q9BUK0 85 aa12.76□□□□□ -0.37
FBXO28-205ENST00000523990 CNFNQ9BYD5 112 aa12.76□□□□□ -0.37
FBXO28-205ENST00000523990 TRBV6-8A0A0A6YYG3 113 aa12.75□□□□□ -0.37
FBXO28-205ENST00000523990 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
FBXO28-205ENST00000523990 NDUFS6O75380 124 aaKnown RBP12.75□□□□□ -0.37
FBXO28-205ENST00000523990 MGPP08493 103 aa12.75□□□□□ -0.37
FBXO28-205ENST00000523990 FAM210AQ96ND0 272 aa12.75□□□□□ -0.37
FBXO28-205ENST00000523990 M0QY20 66 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 TRGC1P0CF51 173 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 NTF3P20783 257 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 SUMO4Q6EEV6 95 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 TM2D2Q9BX73 214 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
FBXO28-205ENST00000523990 EIF5A2Q9GZV4 153 aaKnown RBP12.74□□□□□ -0.37
FBXO28-205ENST00000523990 A0A087WX48 190 aa12.73□□□□□ -0.37
FBXO28-205ENST00000523990 CEBPGP53567 150 aa12.73□□□□□ -0.37
FBXO28-205ENST00000523990 WDR73Q6P4I2 378 aa12.73□□□□□ -0.37
FBXO28-205ENST00000523990 H7C1H1 209 aa12.72□□□□□ -0.37
FBXO28-205ENST00000523990 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
FBXO28-205ENST00000523990 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.72□□□□□ -0.37
FBXO28-205ENST00000523990 DPH3P1Q9H4G8 78 aa12.72□□□□□ -0.37
FBXO28-205ENST00000523990 FAT1Q14517 4588 aa12.72□□□□□ -0.37
FBXO28-205ENST00000523990 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 Q8N814 137 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 DNAJC30Q96LL9 226 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 SMIM7Q9BQ49 75 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 KLK12Q9UKR0 248 aa12.71□□□□□ -0.37
FBXO28-205ENST00000523990 TMEM97Q5BJF2 176 aa12.71□□□□□ -0.38
FBXO28-205ENST00000523990 KCNIP4Q6PIL6 250 aa12.71□□□□□ -0.38
FBXO28-205ENST00000523990 MAPKAPK5-AS1Q8N8E1 139 aa12.71□□□□□ -0.38
FBXO28-205ENST00000523990 KRTAP4-5Q9BYR2 181 aa12.71□□□□□ -0.38
FBXO28-205ENST00000523990 GATCO43716 136 aaKnown RBP12.7□□□□□ -0.38
FBXO28-205ENST00000523990 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
FBXO28-205ENST00000523990 WFDC2Q14508 124 aa12.7□□□□□ -0.38
FBXO28-205ENST00000523990 TWIST1Q15672 202 aa12.7□□□□□ -0.38
FBXO28-205ENST00000523990 MPV17L2Q567V2 206 aa12.7□□□□□ -0.38
FBXO28-205ENST00000523990 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
FBXO28-205ENST00000523990 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 ELOBQ15370 118 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 RASL11AQ6T310 242 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 LINC01551Q86U37 167 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
FBXO28-205ENST00000523990 CT83Q5H943 113 aa12.68□□□□□ -0.38
FBXO28-205ENST00000523990 RMI2Q96E14 147 aa12.68□□□□□ -0.38
FBXO28-205ENST00000523990 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
FBXO28-205ENST00000523990 COX11Q9Y6N1 276 aa12.68□□□□□ -0.38
FBXO28-205ENST00000523990 IGLV5-52A0A0A0MRZ9 124 aa12.67□□□□□ -0.38
FBXO28-205ENST00000523990 ZNF727A8MUV8 499 aa12.67□□□□□ -0.38
FBXO28-205ENST00000523990 GCSHP23434 173 aa12.67□□□□□ -0.38
FBXO28-205ENST00000523990 ATRAIDQ6UW56 229 aa12.67□□□□□ -0.38
FBXO28-205ENST00000523990 TEX261Q6UWH6 196 aa12.67□□□□□ -0.38
FBXO28-205ENST00000523990 TRBV25-1A0A075B6N4 114 aa12.66□□□□□ -0.38
FBXO28-205ENST00000523990 IGKV2D-24A0A075B6R9 120 aa12.66□□□□□ -0.38
FBXO28-205ENST00000523990 A8MWL6 223 aa12.66□□□□□ -0.38
FBXO28-205ENST00000523990 PKIAP61925 76 aa12.66□□□□□ -0.38
FBXO28-205ENST00000523990 IQCJQ1A5X6 159 aa12.66□□□□□ -0.38
FBXO28-205ENST00000523990 LECT2O14960 151 aa12.65□□□□□ -0.38
FBXO28-205ENST00000523990 Q8N1X5 172 aa12.65□□□□□ -0.38
FBXO28-205ENST00000523990 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
FBXO28-205ENST00000523990 NIT2Q9NQR4 276 aa12.65□□□□□ -0.38
FBXO28-205ENST00000523990 FOXA3P55318 350 aaPredicted RBP12.64□□□□□ -0.39
FBXO28-205ENST00000523990 Q0VG73 95 aa12.64□□□□□ -0.39
FBXO28-205ENST00000523990 Q8N976 141 aa12.64□□□□□ -0.39
FBXO28-205ENST00000523990 IGHV1-24A0A0C4DH33 117 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 CRPP02741 224 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 ANGP03950 147 aaKnown RBP12.63□□□□□ -0.39
FBXO28-205ENST00000523990 XGP55808 180 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 ENHOQ6UWT2 76 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 GATD1Q8NB37 220 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 BAALCQ8WXS3 180 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 PGLYRP4Q96LB8 373 aa12.63□□□□□ -0.39
FBXO28-205ENST00000523990 TRAV26-2A0A0B4J265 109 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 GAGE6Q13070 117 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 FRZBQ92765 325 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 OSTCQ9NRP0 149 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 RBX1P62877 108 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 SMIM15Q7Z3B0 74 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 TSKUQ8WUA8 353 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 GFRA4Q9GZZ7 299 aa12.62□□□□□ -0.39
FBXO28-205ENST00000523990 HIGD1CA8MV81 97 aa12.61□□□□□ -0.39
FBXO28-205ENST00000523990 C9JQL5 133 aa12.61□□□□□ -0.39
FBXO28-205ENST00000523990 C1orf43Q9BWL3 253 aa12.61□□□□□ -0.39
FBXO28-205ENST00000523990 SRSF3P84103 164 aaKnown RBP12.6□□□□□ -0.39
FBXO28-205ENST00000523990 FAM74A3Q4VXF1 159 aa12.6□□□□□ -0.39
FBXO28-205ENST00000523990 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
FBXO28-205ENST00000523990 PRR34Q9NV39 138 aa12.6□□□□□ -0.39
FBXO28-205ENST00000523990 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.59□□□□□ -0.39
FBXO28-205ENST00000523990 FAM231BA6NCW3 169 aa12.59□□□□□ -0.39
FBXO28-205ENST00000523990 MIAQ16674 131 aa12.59□□□□□ -0.39
FBXO28-205ENST00000523990 RPL39LQ96EH5 51 aaKnown RBP12.59□□□□□ -0.39
FBXO28-205ENST00000523990 TMEM243Q9BU79 118 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms