RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ALMS1Q8TCU4 4167 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 TRGV1A0A0A0MS02 117 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 SCGB1A1P11684 91 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 ACYP2P14621 99 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 VSTM2AQ8TAG5 236 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 BATF3Q9NR55 127 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 SCP2D1Q9UJQ7 156 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 USF3Q68DE3 2245 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 MAP1BP46821 2468 aaKnown RBP-0.3□□□□□ -2.46
PCM1-217ENST00000522998 OVOS2A0A0J9YW53 1432 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 OVOS2Q6IE36 1432 aa-0.3□□□□□ -2.46
PCM1-217ENST00000522998 PDZD2O15018 2839 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 ADGRB1O14514 1584 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 PIEZO2Q9H5I5 2752 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 CLPSL1A2RUU4 121 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 TSPAN19P0C672 248 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 IGLC6P0CF74 106 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 SPANXN1Q5VSR9 72 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 WFDC6Q9BQY6 131 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 CYP4F30PQ9H0H9 118 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 MRPL40Q9NQ50 206 aaKnown RBP-0.31□□□□□ -2.46
PCM1-217ENST00000522998 GOLGA3Q08378 1498 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 PI4KAP42356 2102 aa-0.31□□□□□ -2.46
PCM1-217ENST00000522998 IBTKQ9P2D0 1353 aaPredicted RBP-0.32□□□□□ -2.46
PCM1-217ENST00000522998 TNXBP22105 4242 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 CSPG4Q6UVK1 2322 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 G3V318 75 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 PITX3O75364 302 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 IFITM1P13164 125 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 GCHFRP30047 84 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 EDDM3BP56851 147 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 HIST1H1AQ02539 215 aaPredicted RBP-0.32□□□□□ -2.46
PCM1-217ENST00000522998 KRTAP19-7Q3SYF9 63 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 C9orf116Q5BN46 136 aaPredicted RBP-0.32□□□□□ -2.46
PCM1-217ENST00000522998 Q5VV11 94 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 MIC13Q5XKP0 118 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 AIF1LQ9BQI0 150 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 GVINP1Q7Z2Y8 2422 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 PLXNB2O15031 1838 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 DISP2A7MBM2 1401 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 APC2O95996 2303 aa-0.32□□□□□ -2.46
PCM1-217ENST00000522998 WNK1Q9H4A3 2382 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 BIVM-ERCC5R4GMW8 1640 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 TRBV10-3A0A0K0K1G6 114 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 FAM236AA0A1B0GUQ0 79 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 FAM236BA0A1B0GV22 79 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 ZNF815PA8K554 130 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 NCR2O95944 276 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 PIRTP0C851 137 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 UBE2D1P51668 147 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 SSBP3-AS1Q7Z2R9 100 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 UBE2DNLQ8IWF7 75 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 PYDC1Q8WXC3 89 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 CNFNQ9BYD5 112 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 MYH8P13535 1937 aa-0.33□□□□□ -2.46
PCM1-217ENST00000522998 WNK3Q9BYP7 1800 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 COL6A3P12111 3177 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 C10orf82Q8WW14 230 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 RPRMQ9NS64 109 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 HECTD4Q9Y4D8 3996 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 SPTA1P02549 2419 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 MYO7BQ6PIF6 2116 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 ZMYM4Q5VZL5 1548 aa-0.34□□□□□ -2.46
PCM1-217ENST00000522998 PRG4Q92954 1404 aaPredicted RBP-0.35□□□□□ -2.47
PCM1-217ENST00000522998 A0A0D9SFI3 127 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 PIN1P1O15428 100 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 SPINK8P0C7L1 97 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 LINC00694P0DN24 101 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 DR1Q01658 176 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 ARHGEF10O15013 1369 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 ANKRD30AQ9BXX3 1397 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 TMEM2Q9UHN6 1383 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 NHSL1Q5SYE7 1610 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 IFT172Q9UG01 1749 aa-0.35□□□□□ -2.47
PCM1-217ENST00000522998 GOLGA4Q13439 2230 aaKnown RBP-0.36□□□□□ -2.47
PCM1-217ENST00000522998 SETXQ7Z333 2677 aaKnown RBP-0.36□□□□□ -2.47
PCM1-217ENST00000522998 M0R129 80 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 IFNA17P01571 189 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 SPRR2DP22532 72 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 CKS1BP61024 79 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 UBE2G1P62253 170 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 ZNF818PQ6ZRF7 136 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 Q6ZUT4 128 aa-0.36□□□□□ -2.47
PCM1-217ENST00000522998 DAPK1P53355 1430 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 NBEAL1Q6ZS30 2694 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 LRRC37A3O60309 1634 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 TRAV1-2A0A0B4J238 106 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 CFDP00746 253 aaPredicted RBP-0.37□□□□□ -2.47
PCM1-217ENST00000522998 PRM1P04553 51 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 AKAP14Q86UN6 197 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 CTAGE3PQ8IX95 158 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 SMIM3Q9BZL3 60 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 GSKIPQ9P0R6 139 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 KDM3BQ7LBC6 1761 aa-0.37□□□□□ -2.47
PCM1-217ENST00000522998 A6NIN4 97 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 J3QR89 54 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 APOC4-APOC2K7ER74 178 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 ARPC5O15511 151 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 CBLN1P23435 193 aa-0.38□□□□□ -2.47
PCM1-217ENST00000522998 WFDC2Q14508 124 aa-0.38□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms