RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 OR5D14Q8NGL3 314 aa1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 SKA2Q8WVK7 121 aaPredicted RBP1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 C4orf3Q8WVX3 66 aa1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 RASL12Q9NYN1 266 aa1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 NAT8BQ9UHF3 227 aa1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 CHCHD2Q9Y6H1 151 aaPredicted RBP1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 SRRM2Q9UQ35 2752 aaKnown RBP1.87□□□□□ -2.11
CTNNA1-233ENST00000522052 NUP210Q8TEM1 1887 aaPredicted RBP1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 IGKV2D-26A0A0A0MRZ7 120 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 HCRTO43612 131 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 HMGA1P17096 107 aaKnown RBP1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 S100A11P31949 105 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 RAB5CP51148 216 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 SURF2Q15527 256 aaPredicted RBP1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 Q8N814 137 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 OR9Q1Q8NGQ5 310 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 KLK9Q9UKQ9 250 aa1.86□□□□□ -2.11
CTNNA1-233ENST00000522052 PLIN4Q96Q06 1357 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 FREM1Q5H8C1 2179 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 IGKV2-29A2NJV5 120 aaPredicted RBP1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 M0R233 179 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 POLR2HP52434 150 aaKnown RBP1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 CNBPP62633 177 aaKnown RBP1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 CDK6Q00534 326 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 C1orf134Q5TEV5 83 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 PYDC1Q8WXC3 89 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 ZC2HC1AQ96GY0 325 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 MED31Q9Y3C7 131 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 HSPB11Q9Y547 144 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 SNURFQ9Y675 71 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 LYSTQ99698 3801 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 DNAH9Q9NYC9 4486 aa1.85□□□□□ -2.11
CTNNA1-233ENST00000522052 HECTD4Q9Y4D8 3996 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 ZNF736B4DX44 427 aaPredicted RBP1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 KPNA4O00629 521 aaPredicted RBP1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 RPL7P18124 248 aaKnown RBP1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 C2orf82Q6UX34 121 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 MUCL1Q96DR8 90 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 HYLS1Q96M11 299 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 CCDC115Q96NT0 180 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 TP53RKQ96S44 253 aa1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 TCEAL2Q9H3H9 227 aaPredicted RBP1.84□□□□□ -2.11
CTNNA1-233ENST00000522052 WNK2Q9Y3S1 2297 aa1.84□□□□□ -2.12
CTNNA1-233ENST00000522052 MYH8P13535 1937 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 A0A087WSZ3 146 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 IGKV2-40A0A087WW87 121 aaPredicted RBP1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 TRAV10A0A0B4J240 114 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 CCDC160A6NGH7 325 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 OR2T8A6NH00 312 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 IGKV2D-40P01614 121 aaPredicted RBP1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 STATHP02808 62 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 FABP2P12104 132 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 SDC2P34741 201 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 ZNF93P35789 620 aaPredicted RBP1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 TEX261Q6UWH6 196 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 HRCT1Q6UXD1 115 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 FAM216BQ8N7L0 139 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 RAB37Q96AX2 223 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 U3KQ87 197 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 PLXNA2O75051 1894 aa1.83□□□□□ -2.12
CTNNA1-233ENST00000522052 IGKV3-7A0A075B6H7 116 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 A0A087WX48 190 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 IGHV1-58A0A0C4DH39 117 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 ERC2-IT1O76042 136 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 ZNF833PQ6ZTB9 187 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 C19orf12Q9NSK7 152 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 KMT2AQ03164 3969 aa1.82□□□□□ -2.12
CTNNA1-233ENST00000522052 SPTY2D1-AS1A0A0U1RR47 76 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 LYRM1O43325 122 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 RPS3P23396 243 aaKnown RBP eCLIP1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 NDUFA6P56556 154 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 TMEM35BQ8NCS4 154 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 MCEEQ96PE7 176 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 TAF9BQ9HBM6 251 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 TRAPPC2LQ9UL33 140 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 EML6Q6ZMW3 1958 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 HSPG2P98160 4391 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 PKHD1P08F94 4074 aa1.81□□□□□ -2.12
CTNNA1-233ENST00000522052 TRAV27A0A087WT01 109 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 LOC110117498A0A087WWA1 95 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 A0A096LNT2 108 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 MT-ND6P03923 174 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 CD2P06729 351 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 TMEM14EPQ6UXP3 125 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 ARPINQ7Z6K5 226 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 LRRC18Q8N456 261 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 PATE1Q8WXA2 126 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 CCL19Q99731 98 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 LXNQ9BS40 222 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 GGACTQ9BVM4 153 aa1.8□□□□□ -2.12
CTNNA1-233ENST00000522052 MYH4Q9Y623 1939 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 RPS28P62857 69 aaKnown RBP1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 KRTAP26-1Q6PEX3 210 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 LINC00305Q7Z4B0 112 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 DIRC1Q969H9 104 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 CDC42SE1Q9NRR8 79 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 TAS2R7Q9NYW3 318 aa1.79□□□□□ -2.12
CTNNA1-233ENST00000522052 HEATR5BQ9P2D3 2071 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms