RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 S100A11P31949 105 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 TWIST1Q15672 202 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 ARL6IP6Q8N6S5 226 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 THAP6Q8TBB0 222 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
TRAPPC9-212ENST00000521944 SSPOA2VEC9 5147 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 TRAV1-1A0A0B4J248 108 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 ARMS2P0C7Q2 107 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 S100A4P26447 101 aaKnown RBP5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 AMTP48728 403 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 SULT1A1P50225 295 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 BCAP31P51572 246 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 TPRXLQ17RH7 258 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 IQCJQ1A5X6 159 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 PHF5AQ7RTV0 110 aaKnown RBP5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 TMEM252Q8N6L7 170 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 CMTM2Q8TAZ6 248 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 MBD2Q9UBB5 411 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 FLVCR2Q9UPI3 526 aa5.18□□□□□ -1.58
TRAPPC9-212ENST00000521944 TRBV6-1A0A0K0K1D8 114 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 A0A1B0GUV1 79 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 L7N2F9 121 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 RPL13AP40429 203 aaKnown RBP5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 VAMP2P63027 116 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 CYCSP99999 105 aaKnown RBP5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 DNLZQ5SXM8 178 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 CFAP161Q6P656 301 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 MPLKIPQ8TAP9 179 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 DERL1Q9BUN8 251 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 LYRM2Q9NU23 88 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 PSG8Q9UQ74 426 aa5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 LSM5Q9Y4Y9 91 aaKnown RBP5.17□□□□□ -1.58
TRAPPC9-212ENST00000521944 CRIP1P50238 77 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 UBE2D1P51668 147 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 RAB2AP61019 212 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 MT1HP80294 61 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 SMUG1Q53HV7 270 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 C9orf116Q5BN46 136 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 OR11H4Q8NGC9 324 aa5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 RPP21Q9H633 154 aaKnown RBP5.16□□□□□ -1.58
TRAPPC9-212ENST00000521944 TRBV25-1A0A075B6N4 114 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 GRIFINA4D1Z8 144 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 KRBOX1C9JBD0 128 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 M0R381 172 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 TCRAP04437 139 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 RAB4BP61018 213 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 NDFIP1Q9BT67 221 aa5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 RSL24D1Q9UHA3 163 aaKnown RBP5.15□□□□□ -1.59
TRAPPC9-212ENST00000521944 CRYGAP11844 174 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 FAUP35544 74 aaKnown RBP5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 GAGE2BQ13066 116 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 IL15RAQ13261 267 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 ATP6V1FQ16864 119 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 PRNTQ86SH4 94 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 OR5C1Q8NGR4 320 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 AQP10Q96PS8 301 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 CARHSP1Q9Y2V2 147 aaKnown RBP5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 USH2AO75445 5202 aa5.14□□□□□ -1.59
TRAPPC9-212ENST00000521944 A0A087WXM4 84 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 A0A087X002 238 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 B4DEV8 164 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 PRYO14603 147 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 KRTAP10-6P60371 365 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 HBG1P69891 147 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 HBG2P69892 147 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 FLI1Q01543 452 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 SPCS2Q15005 226 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 KHDC3LQ587J8 217 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 TMEM97Q5BJF2 176 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 TOMM5Q8N4H5 51 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 CHCHD10Q8WYQ3 142 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 CARD19Q96LW7 228 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 SDHCQ99643 169 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 Q9H521 79 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 PHLDA3Q9Y5J5 127 aa5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 SYNE2Q8WXH0 6885 aaKnown RBP5.13□□□□□ -1.59
TRAPPC9-212ENST00000521944 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 IGLV7-46A0A075B6I9 117 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 IGHV1-24A0A0C4DH33 117 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 FABP5P3A8MUU1 101 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 M0R036 132 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 NDUFB6O95139 128 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 ASB16-AS1Q495Z4 193 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 FAM74A1Q5RGS3 127 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 NRACQ8N912 160 aa5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 ZNF471Q9BX82 626 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 WDR61Q9GZS3 305 aaKnown RBP5.12□□□□□ -1.59
TRAPPC9-212ENST00000521944 A0A087WZ39 114 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 TRAV34A0A0B4J273 112 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 IGKV3OR2-268A0A0C4DH90 116 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 BCL2P10415 239 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 SULT1A2P50226 295 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 ZNF56Q15929 161 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 STX12Q86Y82 276 aa5.11□□□□□ -1.59
TRAPPC9-212ENST00000521944 TRAV6A0A075B6T7 132 aa5.1□□□□□ -1.59
TRAPPC9-212ENST00000521944 SERTM2A0A1B0GWG4 89 aa5.1□□□□□ -1.59
TRAPPC9-212ENST00000521944 TAS2R45P59539 299 aa5.1□□□□□ -1.59
TRAPPC9-212ENST00000521944 AP3S2P59780 193 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms