RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 HIST1H1EP10412 219 aaKnown RBP1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 G0S2P27469 103 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 SRIP30626 198 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 GNG4P50150 75 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF90Q03938 601 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 SS18Q15532 418 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 RTL8BQ17RB0 113 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 TDRG1Q3Y452 100 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 MORN2Q502X0 79 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 RPL39P5Q59GN2 51 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPRNQ5BIV9 151 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF833PQ6ZTB9 187 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 C2orf91Q6ZV80 131 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 MIR17HGQ75NE6 70 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPATA12Q7Z6I5 190 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR8I2Q8N0Y5 310 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 ST6GALNAC3Q8NDV1 305 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR2D3Q8NGH3 330 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR1L8Q8NGR8 309 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 C18orf32Q8TCD1 76 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 FAM167A-AS1Q96KT0 104 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 NABP2Q9BQ15 211 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 TMEM167BQ9NRX6 74 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 BET1LQ9NYM9 111 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 MRPL27Q9P0M9 148 aaKnown RBP1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 MED13LQ71F56 2210 aa1.54□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZFHX2Q9C0A1 2572 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPEGQ15772 3267 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 IGHV1-69-2A0A0G2JMI3 117 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 C20orf202A1L168 122 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 SDHAF1A6NFY7 115 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 C2orf70A6NJV1 201 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 COL6A6A6NMZ7 2263 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF705FA8MVS1 300 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 DEFB108AA8MXU0 73 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF73O43830 326 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 HYPMO75409 117 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 HLA-DRB1P01911 266 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 GPX1P07203 203 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 C3orf79P0CE67 100 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF705DP0CH99 300 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF705BP0CI00 300 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 SAA1P0DJI8 122 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 VCANP13611 3396 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF25P17030 456 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 PTPRZ1P23471 2315 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF137PP52743 207 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 TCL1AP56279 114 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 TAS2R45P59539 299 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 KRTDAPP60985 99 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 HSPE1P61604 102 aaKnown RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 UBE2L3P68036 154 aaKnown RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 EDDM3AQ14507 147 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 FXYD3Q14802 87 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 SPATA45Q537H7 98 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 COL5A1-AS1Q5SY13 56 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 IBA57Q5T440 356 aaKnown RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 GDF5OSQ5U4N7 250 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 TEX36Q5VZQ5 186 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 MRPL54Q6P161 138 aaKnown RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZNF705AQ6ZN79 300 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 Q86TA4 180 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 BAGE3Q86Y29 109 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 BAGE2Q86Y30 109 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 OR8B3Q8NGG8 313 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 TSKUQ8WUA8 353 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 GAFA1Q96PS6 74 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 MUC4Q99102 2169 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 CCL13Q99616 98 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 RNASE7Q9H1E1 156 aaKnown RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 NPVFQ9HCQ7 196 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 UQCR10Q9UDW1 63 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 NAT8BQ9UHF3 227 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 MYO15AQ9UKN7 3530 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 PRNDQ9UKY0 176 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 ZFP30Q9Y2G7 519 aa1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 SOX21Q9Y651 276 aaPredicted RBP1.53□□□□□ -2.16
HMGN1P28-201ENST00000521340 LAMA1P25391 3075 aa1.53□□□□□ -2.17
HMGN1P28-201ENST00000521340 MAP1BP46821 2468 aaKnown RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 CACNA1BQ00975 2339 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 EYSQ5T1H1 3165 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGHV1-24A0A0C4DH33 117 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TRBV6-1A0A0K0K1D8 114 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 TCRBV4S1A1TA0A5B7 111 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGLC7A0M8Q6 106 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 E7EQL1 145 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 CORTO00230 105 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 LST1O00453 97 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 APOA2P02652 100 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 IGKV1-16P04430 117 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 CTSGP08311 255 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 PYYP10082 97 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 GLRXP35754 106 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 GNG10P50151 68 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 RPS20P60866 119 aaKnown RBP1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 UBE2G1P62253 170 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 GNG5P63218 68 aa1.52□□□□□ -2.17
HMGN1P28-201ENST00000521340 RPL19P84098 196 aaKnown RBP1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms