RNA–Protein interactions for RNA: ENST00000521067.1

PABPC1-217, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-217ENST00000521067 PRSS1P07477 247 aa13.1□□□□□ -0.31
PABPC1-217ENST00000521067 CXCL1P09341 107 aa13.1□□□□□ -0.31
PABPC1-217ENST00000521067 C14orf177Q52M58 125 aa13.1□□□□□ -0.31
PABPC1-217ENST00000521067 KRTAP26-1Q6PEX3 210 aa13.1□□□□□ -0.31
PABPC1-217ENST00000521067 CHCHD5Q9BSY4 110 aa13.1□□□□□ -0.31
PABPC1-217ENST00000521067 CRPP02741 224 aa13.09□□□□□ -0.31
PABPC1-217ENST00000521067 OR5AL1P0C617 328 aa13.09□□□□□ -0.31
PABPC1-217ENST00000521067 OXTP01178 125 aa13.08□□□□□ -0.32
PABPC1-217ENST00000521067 S100A9P06702 114 aaKnown RBP13.08□□□□□ -0.32
PABPC1-217ENST00000521067 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
PABPC1-217ENST00000521067 FAM213BQ8TBF2 198 aa13.08□□□□□ -0.32
PABPC1-217ENST00000521067 PRR34Q9NV39 138 aa13.08□□□□□ -0.32
PABPC1-217ENST00000521067 VAX2Q9UIW0 290 aa13.08□□□□□ -0.32
PABPC1-217ENST00000521067 F5H697 171 aa13.07□□□□□ -0.32
PABPC1-217ENST00000521067 HLA-DQA1P01909 254 aa13.07□□□□□ -0.32
PABPC1-217ENST00000521067 HNRNPA3P51991 378 aaKnown RBP13.07□□□□□ -0.32
PABPC1-217ENST00000521067 RBX1P62877 108 aa13.07□□□□□ -0.32
PABPC1-217ENST00000521067 KCNRGQ8N5I3 272 aa13.07□□□□□ -0.32
PABPC1-217ENST00000521067 PANO1I0J062 215 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 GAGE6Q13070 117 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 MIAQ16674 131 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 SERTAD4-AS1Q5TG53 156 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 CLPSL2Q6UWE3 100 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 TMUB2Q71RG4 321 aa13.06□□□□□ -0.32
PABPC1-217ENST00000521067 LINC00269Q8N2A0 174 aa13.05□□□□□ -0.32
PABPC1-217ENST00000521067 C9orf163Q8N9P6 203 aa13.05□□□□□ -0.32
PABPC1-217ENST00000521067 DAZAP1Q96EP5 407 aaKnown RBP13.05□□□□□ -0.32
PABPC1-217ENST00000521067 DERL1Q9BUN8 251 aa13.05□□□□□ -0.32
PABPC1-217ENST00000521067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.05□□□□□ -0.32
PABPC1-217ENST00000521067 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
PABPC1-217ENST00000521067 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
PABPC1-217ENST00000521067 GZMBP10144 247 aa13.03□□□□□ -0.32
PABPC1-217ENST00000521067 RPL37AP61513 92 aaKnown RBP13.03□□□□□ -0.32
PABPC1-217ENST00000521067 PFDN1O60925 122 aa13.02□□□□□ -0.33
PABPC1-217ENST00000521067 RPL35P42766 123 aaKnown RBP13.02□□□□□ -0.33
PABPC1-217ENST00000521067 PKIAP61925 76 aa13.02□□□□□ -0.33
PABPC1-217ENST00000521067 CCL20P78556 96 aa13.02□□□□□ -0.33
PABPC1-217ENST00000521067 ZNF345Q14585 488 aa13.02□□□□□ -0.33
PABPC1-217ENST00000521067 SDIM1Q6ZPB5 146 aa13.02□□□□□ -0.33
PABPC1-217ENST00000521067 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.02□□□□□ -0.33
PABPC1-217ENST00000521067 M0QY20 66 aa13.01□□□□□ -0.33
PABPC1-217ENST00000521067 H2AFB1P0C5Y9 115 aa13.01□□□□□ -0.33
PABPC1-217ENST00000521067 IQCJQ1A5X6 159 aa13.01□□□□□ -0.33
PABPC1-217ENST00000521067 TMEM97Q5BJF2 176 aa13.01□□□□□ -0.33
PABPC1-217ENST00000521067 TRBV25-1A0A075B6N4 114 aa13□□□□□ -0.33
PABPC1-217ENST00000521067 SMIM17P0DL12 118 aa13□□□□□ -0.33
PABPC1-217ENST00000521067 RGS21Q2M5E4 152 aa13□□□□□ -0.33
PABPC1-217ENST00000521067 AP1S3Q96PC3 154 aa13□□□□□ -0.33
PABPC1-217ENST00000521067 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
PABPC1-217ENST00000521067 IGLC6P0CF74 106 aa12.99□□□□□ -0.33
PABPC1-217ENST00000521067 C20orf203Q8NBC4 194 aa12.99□□□□□ -0.33
PABPC1-217ENST00000521067 IGHV1-24A0A0C4DH33 117 aa12.98□□□□□ -0.33
PABPC1-217ENST00000521067 HMSDA8MTL9 139 aa12.98□□□□□ -0.33
PABPC1-217ENST00000521067 REG3AQ06141 175 aa12.98□□□□□ -0.33
PABPC1-217ENST00000521067 SUMO4Q6EEV6 95 aa12.98□□□□□ -0.33
PABPC1-217ENST00000521067 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
PABPC1-217ENST00000521067 IGLV4-60A0A075B6I1 120 aa12.97□□□□□ -0.33
PABPC1-217ENST00000521067 BCL2L11O43521 198 aa12.97□□□□□ -0.33
PABPC1-217ENST00000521067 SLPIP03973 132 aa12.97□□□□□ -0.33
PABPC1-217ENST00000521067 C11orf52Q96A22 123 aa12.97□□□□□ -0.33
PABPC1-217ENST00000521067 TPPP3Q9BW30 176 aa12.97□□□□□ -0.33
PABPC1-217ENST00000521067 A0A0D9SG52 128 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 MGPP08493 103 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 CENPWQ5EE01 88 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 FER1L6-AS1Q8NA97 138 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 GNG13Q9P2W3 67 aa12.96□□□□□ -0.33
PABPC1-217ENST00000521067 RAB19A4D1S5 217 aa12.95□□□□□ -0.34
PABPC1-217ENST00000521067 NKX2-5P52952 324 aaPredicted RBP12.95□□□□□ -0.34
PABPC1-217ENST00000521067 OR2D3Q8NGH3 330 aa12.95□□□□□ -0.34
PABPC1-217ENST00000521067 TNXBP22105 4242 aa12.94□□□□□ -0.34
PABPC1-217ENST00000521067 KANTRA0A1W2PQU2 76 aa12.94□□□□□ -0.34
PABPC1-217ENST00000521067 CNBPP62633 177 aaKnown RBP12.94□□□□□ -0.34
PABPC1-217ENST00000521067 CLRN3Q8NCR9 226 aa12.94□□□□□ -0.34
PABPC1-217ENST00000521067 PLA2G2DQ9UNK4 145 aa12.94□□□□□ -0.34
PABPC1-217ENST00000521067 A0A1B0GUV1 79 aa12.93□□□□□ -0.34
PABPC1-217ENST00000521067 MT1HL1P0DM35 61 aa12.93□□□□□ -0.34
PABPC1-217ENST00000521067 RAB5CP51148 216 aa12.93□□□□□ -0.34
PABPC1-217ENST00000521067 CIRBPQ14011 172 aaKnown RBP12.93□□□□□ -0.34
PABPC1-217ENST00000521067 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
PABPC1-217ENST00000521067 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
PABPC1-217ENST00000521067 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 TRAV1-1A0A0B4J248 108 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 H7C1H1 209 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 P01737 135 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 RPS20P60866 119 aaKnown RBP12.91□□□□□ -0.34
PABPC1-217ENST00000521067 CACNG7P62955 275 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 RASL11AQ6T310 242 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
PABPC1-217ENST00000521067 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
PABPC1-217ENST00000521067 CHTF8P0CG12 524 aa12.9□□□□□ -0.34
PABPC1-217ENST00000521067 NTF3P20783 257 aa12.89□□□□□ -0.35
PABPC1-217ENST00000521067 NIT2Q9NQR4 276 aa12.89□□□□□ -0.35
PABPC1-217ENST00000521067 EIF5AP63241 154 aaKnown RBP12.88□□□□□ -0.35
PABPC1-217ENST00000521067 PGLYRP4Q96LB8 373 aa12.88□□□□□ -0.35
PABPC1-217ENST00000521067 A0A087WYN8 130 aa12.87□□□□□ -0.35
PABPC1-217ENST00000521067 F2Z2F3 143 aa12.87□□□□□ -0.35
PABPC1-217ENST00000521067 GNG4P50150 75 aa12.87□□□□□ -0.35
PABPC1-217ENST00000521067 C9orf62Q8N4C0 152 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms