RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 MT-CO2P00403 227 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 KRASP01116 189 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 MT-ND6P03923 174 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 HTN3P15516 51 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 NPY1RP25929 384 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 YPEL3P61236 119 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 RPL23P62829 140 aaKnown RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 SLC38A11Q08AI6 406 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 CATR1Q13166 79 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 KIAA0087Q14695 138 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 PLGLAQ15195 96 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ADIRFQ15847 76 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 TAL2Q16559 108 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 RTL8BQ17RB0 113 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM183BQ1AE95 376 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 TTC32Q5I0X7 151 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ZC2HC1BQ5TFG8 222 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 LCN15Q6UWW0 184 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 TOMM20LQ6UXN7 152 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 C1orf158Q8N1D5 194 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF664Q8N3J9 261 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 GTSF1Q8WW33 167 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 GPR146Q96CH1 333 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 RPUSD4Q96CM3 377 aaKnown RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 PAXXQ9BUH6 204 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF430Q9H8G1 570 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 SLC25A22Q9H936 323 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 DAZ1Q9NQZ3 744 aaKnown RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 CCL28Q9NRJ3 127 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 FKBP11Q9NYL4 201 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 NAGKQ9UJ70 344 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 JPT1Q9UK76 154 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 UFC1Q9Y3C8 167 aa2.45□□□□□ -2.02
VPS13B-208ENST00000521037 MRPS16Q9Y3D3 137 aaKnown RBP2.45□□□□□ -2.02
VPS13B-208ENST00000521037 IGHV3-49A0A0A0MS15 119 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1-6A0A0C4DH72 117 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 IGHV7-4-1A0A0J9YVY3 117 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 A0A1B0GV50 99 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 C20orf202A1L168 122 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 ZNF705GA8MUZ8 300 aaPredicted RBP2.44□□□□□ -2.02
VPS13B-208ENST00000521037 C9JCJ5 164 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 FNDC10F2Z333 226 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 SNAI2O43623 268 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 EMP1P54849 157 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 CCL18P55774 89 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 Q0VG73 95 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 RAB31Q13636 194 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 C5orf47Q569G3 176 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 PDZD11Q5EBL8 140 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 TEX43Q6ZNM6 134 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 TMEM144Q7Z5S9 345 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 PDPNQ86YL7 162 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 OR10P1Q8NGE3 313 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 OR4B1Q8NGF8 309 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 OR2D3Q8NGH3 330 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 OR10G9Q8NGN4 311 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 OR51H1Q8NH63 302 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 NEK7Q8TDX7 302 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 DCANP1Q8TF63 244 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 VSIG2Q96IQ7 327 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 LINC01600Q96MT4 127 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 MIEN1Q9BRT3 115 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 RHPN1-AS1Q9BWJ2 59 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 MS4A6AQ9H2W1 248 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 PRO1933Q9H354 126 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 VSIRQ9H7M9 311 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 YTHDF2Q9Y5A9 579 aaKnown RBP2.44□□□□□ -2.02
VPS13B-208ENST00000521037 PXMP4Q9Y6I8 212 aa2.44□□□□□ -2.02
VPS13B-208ENST00000521037 TRAV2A0A0B4J234 112 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 NDUFA4O00483 81 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 RBFOX2O43251 390 aaKnown RBP eCLIP2.43□□□□□ -2.02
VPS13B-208ENST00000521037 DLEU1O43261 78 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 CXorf1O96002 111 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 IGKV1-5P01602 117 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 CTSGP08311 255 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 OR10J4P0C629 311 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 RD3LP0DJH9 198 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 PFN2P35080 140 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 OPRK1P41145 380 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 CDC34P49427 236 aaPredicted RBP2.43□□□□□ -2.02
VPS13B-208ENST00000521037 DEFB1P60022 68 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
VPS13B-208ENST00000521037 C14orf177Q52M58 125 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 OR10J3Q5JRS4 329 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 SPANXN5Q5MJ07 72 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 COL5A1-AS1Q5SY13 56 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 FAM162BQ5T6X4 162 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 RASL11AQ6T310 242 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 Q6ZRU5 148 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 LINC01551Q86U37 167 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 Q8N814 137 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 CMTM2Q8TAZ6 248 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 DTD1Q8TEA8 209 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 SFRP2Q96HF1 295 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 HSD17B10Q99714 261 aaKnown RBP2.43□□□□□ -2.02
VPS13B-208ENST00000521037 RSG1Q9BU20 258 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 CHAC1Q9BUX1 264 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
VPS13B-208ENST00000521037 SNHG12Q9BXW3 62 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms