RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 CUL7Q14999 1698 aa1.14□□□□□ -2.23
PTPN12-214ENST00000520947 PXDNQ92626 1479 aa1.14□□□□□ -2.23
PTPN12-214ENST00000520947 S100A1P23297 94 aa1.14□□□□□ -2.23
PTPN12-214ENST00000520947 CASKIN1Q8WXD9 1431 aa1.14□□□□□ -2.23
PTPN12-214ENST00000520947 SNRNP200O75643 2136 aaKnown RBP1.13□□□□□ -2.23
PTPN12-214ENST00000520947 A0A087WTM6 91 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 TRAV13-2A0A0B4J235 113 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 SPINT3P49223 89 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 RPL37P61927 97 aaKnown RBP1.13□□□□□ -2.23
PTPN12-214ENST00000520947 RBM3P98179 157 aaKnown RBP1.13□□□□□ -2.23
PTPN12-214ENST00000520947 INSL4Q14641 139 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 C9orf153Q5TBE3 101 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 MAPKBP1O60336 1514 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 MUC22E2RYF6 1773 aaPredicted RBP1.13□□□□□ -2.23
PTPN12-214ENST00000520947 CPSF1Q10570 1443 aaKnown RBP1.13□□□□□ -2.23
PTPN12-214ENST00000520947 ATG2AQ2TAZ0 1938 aa1.13□□□□□ -2.23
PTPN12-214ENST00000520947 LRRC37A3O60309 1634 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 A0A096LNT2 108 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 SIX6O95475 246 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 LY6G6CO95867 125 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 AQP10Q96PS8 301 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 V9GYV3 84 aa1.12□□□□□ -2.23
PTPN12-214ENST00000520947 MED12Q93074 2177 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 C20orf202A1L168 122 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 CLPSL1A2RUU4 121 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 HCG22E2RYF7 251 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 PRB3Q04118 309 aaPredicted RBP1.11□□□□□ -2.23
PTPN12-214ENST00000520947 SPINK9Q5DT21 86 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 PZPP20742 1482 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 MYH7P12883 1935 aa1.11□□□□□ -2.23
PTPN12-214ENST00000520947 KIAA0100Q14667 2235 aaKnown RBP1.11□□□□□ -2.23
PTPN12-214ENST00000520947 NRXN2Q9P2S2 1712 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 NRKQ7Z2Y5 1582 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 OOSP1A8MZH6 123 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 SSSCA1O60232 199 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 ATP5EP56381 51 aaPredicted RBP1.1□□□□□ -2.23
PTPN12-214ENST00000520947 EDDM3BP56851 147 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 C5orf38Q86SI9 138 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 SCP2D1Q9UJQ7 156 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 LINC00312Q9Y6C7 94 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 AFDNP55196 1824 aaKnown RBP1.1□□□□□ -2.23
PTPN12-214ENST00000520947 CITO14578 2027 aa1.1□□□□□ -2.23
PTPN12-214ENST00000520947 ABCA4P78363 2273 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 ZNF137PP52743 207 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 GTF2H5Q6ZYL4 71 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 COMMD6Q7Z4G1 85 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 SVBPQ8N300 66 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 C12orf57Q99622 126 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 LAMA4Q16363 1823 aa1.09□□□□□ -2.23
PTPN12-214ENST00000520947 NWD2Q9ULI1 1742 aa1.09□□□□□ -2.24
PTPN12-214ENST00000520947 RBBP6Q7Z6E9 1792 aaKnown RBP1.08□□□□□ -2.24
PTPN12-214ENST00000520947 PPIP5K1Q6PFW1 1433 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 UBE2L5PA0A1B0GUS4 154 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 FAM24AA6NFZ4 105 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 F2Z2F3 143 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 UBE2L3P68036 154 aaKnown RBP1.08□□□□□ -2.24
PTPN12-214ENST00000520947 BPESC1Q9GZL8 116 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 CYP4F30PQ9H0H9 118 aa1.08□□□□□ -2.24
PTPN12-214ENST00000520947 CDK13Q14004 1512 aaKnown RBP1.08□□□□□ -2.24
PTPN12-214ENST00000520947 IFITM1P13164 125 aa1.07□□□□□ -2.24
PTPN12-214ENST00000520947 C6orf52Q5T4I8 152 aa1.07□□□□□ -2.24
PTPN12-214ENST00000520947 ZDBF2Q9HCK1 2354 aa1.07□□□□□ -2.24
PTPN12-214ENST00000520947 MYH9P35579 1960 aaKnown RBP1.07□□□□□ -2.24
PTPN12-214ENST00000520947 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 TTC9CQ8N5M4 171 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 C14orf144Q96I85 54 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 Q96NJ1 140 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 ESPL1Q14674 2120 aa1.06□□□□□ -2.24
PTPN12-214ENST00000520947 PHIPQ8WWQ0 1821 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 ATP6V1G2-DDX39BF2Z307 99 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 SMIM6P0DI80 62 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 C10orf128Q5T292 105 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 SMIM11BQ8TCY0 68 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 LENEPQ9Y5L5 61 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 PLXNA1Q9UIW2 1896 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 C10orf71Q711Q0 1435 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 MRC2Q9UBG0 1479 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 ZFYVE16Q7Z3T8 1539 aa1.05□□□□□ -2.24
PTPN12-214ENST00000520947 ACYP2P14621 99 aa1.04□□□□□ -2.24
PTPN12-214ENST00000520947 HSD52Q0P140 79 aa1.04□□□□□ -2.24
PTPN12-214ENST00000520947 MYOZ3Q8TDC0 251 aa1.04□□□□□ -2.24
PTPN12-214ENST00000520947 WFDC6Q9BQY6 131 aa1.04□□□□□ -2.24
PTPN12-214ENST00000520947 SPTBP11277 2137 aa1.04□□□□□ -2.24
PTPN12-214ENST00000520947 ARAP2Q8WZ64 1704 aa1.03□□□□□ -2.24
PTPN12-214ENST00000520947 RBP2P50120 134 aa1.03□□□□□ -2.24
PTPN12-214ENST00000520947 DCDP81605 110 aaKnown RBP1.03□□□□□ -2.24
PTPN12-214ENST00000520947 SHROOM2Q13796 1616 aa1.03□□□□□ -2.24
PTPN12-214ENST00000520947 MAP2P11137 1827 aaKnown RBP1.03□□□□□ -2.25
PTPN12-214ENST00000520947 A0A0D9SG42 100 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 TMEM218A2RU14 115 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 PPP1R17O96001 155 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 SPINK8P0C7L1 97 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 CCL18P55774 89 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 VMO1Q7Z5L0 202 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 PRR15LQ9BU68 103 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 DPH3P1Q9H4G8 78 aa1.02□□□□□ -2.25
PTPN12-214ENST00000520947 KNTC1P50748 2209 aa1.01□□□□□ -2.25
PTPN12-214ENST00000520947 SIPA1L3O60292 1781 aaPredicted RBP1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms