RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 AP1S3Q96PC3 154 aa13.54□□□□□ -0.24
SNHG6-203ENST00000520944 TPPP3Q9BW30 176 aa13.54□□□□□ -0.24
SNHG6-203ENST00000520944 FAM30AQ9NZY2 134 aa13.54□□□□□ -0.24
SNHG6-203ENST00000520944 RBFOX3A6NFN3 312 aa13.53□□□□□ -0.24
SNHG6-203ENST00000520944 RPS20P60866 119 aaKnown RBP13.53□□□□□ -0.24
SNHG6-203ENST00000520944 PKIAP61925 76 aa13.53□□□□□ -0.24
SNHG6-203ENST00000520944 PDE6DO43924 150 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 IFNA1P01562 189 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 GNG4P50150 75 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 SULT1A2P50226 295 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 TMEM97Q5BJF2 176 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
SNHG6-203ENST00000520944 CRPP02741 224 aa13.51□□□□□ -0.25
SNHG6-203ENST00000520944 MEF2BQ02080 365 aaPredicted RBP13.51□□□□□ -0.25
SNHG6-203ENST00000520944 C15orf54Q8N8G6 183 aa13.51□□□□□ -0.25
SNHG6-203ENST00000520944 FER1L6-AS1Q8NA97 138 aa13.51□□□□□ -0.25
SNHG6-203ENST00000520944 SMIM12Q96EX1 92 aa13.51□□□□□ -0.25
SNHG6-203ENST00000520944 C1orf43Q9BWL3 253 aa13.51□□□□□ -0.25
SNHG6-203ENST00000520944 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 RAB19A4D1S5 217 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 ANGP03950 147 aaKnown RBP13.5□□□□□ -0.25
SNHG6-203ENST00000520944 GZMBP10144 247 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 ATRAIDQ6UW56 229 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 MED9Q9NWA0 146 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
SNHG6-203ENST00000520944 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 P01737 135 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 CACNG7P62955 275 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 MPV17L2Q567V2 206 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 TCTE3Q8IZS6 198 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 BIN3Q9NQY0 253 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 MYCBP2O75592 4640 aa13.49□□□□□ -0.25
SNHG6-203ENST00000520944 C19orf71A6NCJ1 209 aa13.48□□□□□ -0.25
SNHG6-203ENST00000520944 MGPP08493 103 aa13.48□□□□□ -0.25
SNHG6-203ENST00000520944 ENHOQ6UWT2 76 aa13.48□□□□□ -0.25
SNHG6-203ENST00000520944 SLC51BQ86UW2 128 aa13.48□□□□□ -0.25
SNHG6-203ENST00000520944 VAX2Q9UIW0 290 aa13.48□□□□□ -0.25
SNHG6-203ENST00000520944 F2Z2F3 143 aa13.47□□□□□ -0.25
SNHG6-203ENST00000520944 H7C1H1 209 aa13.47□□□□□ -0.25
SNHG6-203ENST00000520944 IGLC6P0CF74 106 aa13.47□□□□□ -0.25
SNHG6-203ENST00000520944 C14orf177Q52M58 125 aa13.47□□□□□ -0.25
SNHG6-203ENST00000520944 Q6ZSA8 131 aa13.47□□□□□ -0.25
SNHG6-203ENST00000520944 TRBV25-1A0A075B6N4 114 aa13.46□□□□□ -0.25
SNHG6-203ENST00000520944 BCL2P10415 239 aa13.46□□□□□ -0.25
SNHG6-203ENST00000520944 LINC01620Q4KN68 170 aa13.46□□□□□ -0.25
SNHG6-203ENST00000520944 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
SNHG6-203ENST00000520944 M0QY20 66 aa13.44□□□□□ -0.26
SNHG6-203ENST00000520944 PLA2G1BP04054 148 aaKnown RBP13.44□□□□□ -0.26
SNHG6-203ENST00000520944 TAGLN2P37802 199 aaKnown RBP13.44□□□□□ -0.26
SNHG6-203ENST00000520944 MIAQ16674 131 aa13.44□□□□□ -0.26
SNHG6-203ENST00000520944 DMBT1Q9UGM3 2413 aaPredicted RBP13.44□□□□□ -0.26
SNHG6-203ENST00000520944 IGHV1-24A0A0C4DH33 117 aa13.43□□□□□ -0.26
SNHG6-203ENST00000520944 TRGC1P0CF51 173 aa13.43□□□□□ -0.26
SNHG6-203ENST00000520944 GAGE6Q13070 117 aa13.43□□□□□ -0.26
SNHG6-203ENST00000520944 SUMO4Q6EEV6 95 aa13.43□□□□□ -0.26
SNHG6-203ENST00000520944 LYZL1Q6UWQ5 148 aa13.43□□□□□ -0.26
SNHG6-203ENST00000520944 TRBV20OR9-2A0A075B6H5 130 aa13.42□□□□□ -0.26
SNHG6-203ENST00000520944 RBX1P62877 108 aa13.42□□□□□ -0.26
SNHG6-203ENST00000520944 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 NTF3P20783 257 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 IQCJQ1A5X6 159 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 LINC00528Q8N1L1 170 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 LINC00269Q8N2A0 174 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 NUDT10Q8NFP7 164 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 NUDT11Q96G61 164 aa13.41□□□□□ -0.26
SNHG6-203ENST00000520944 NKX2-5P52952 324 aaPredicted RBP13.4□□□□□ -0.26
SNHG6-203ENST00000520944 RASL11AQ6T310 242 aa13.4□□□□□ -0.26
SNHG6-203ENST00000520944 C9orf62Q8N4C0 152 aa13.4□□□□□ -0.26
SNHG6-203ENST00000520944 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
SNHG6-203ENST00000520944 FLG2Q5D862 2391 aaPredicted RBP13.39□□□□□ -0.27
SNHG6-203ENST00000520944 WDR73Q6P4I2 378 aa13.39□□□□□ -0.27
SNHG6-203ENST00000520944 CLPSL2Q6UWE3 100 aa13.39□□□□□ -0.27
SNHG6-203ENST00000520944 SCXQ7RTU7 201 aa13.39□□□□□ -0.27
SNHG6-203ENST00000520944 CHAC1Q9BUX1 264 aa13.39□□□□□ -0.27
SNHG6-203ENST00000520944 PRR34Q9NV39 138 aa13.39□□□□□ -0.27
SNHG6-203ENST00000520944 USP17L23D6RBM5 183 aa13.38□□□□□ -0.27
SNHG6-203ENST00000520944 TWIST1Q15672 202 aa13.38□□□□□ -0.27
SNHG6-203ENST00000520944 NIT2Q9NQR4 276 aa13.38□□□□□ -0.27
SNHG6-203ENST00000520944 TMEM243Q9BU79 118 aa13.37□□□□□ -0.27
SNHG6-203ENST00000520944 RPP21Q9H633 154 aaKnown RBP13.37□□□□□ -0.27
SNHG6-203ENST00000520944 CTRLP40313 264 aa13.36□□□□□ -0.27
SNHG6-203ENST00000520944 Q6ZNX1 250 aa13.36□□□□□ -0.27
SNHG6-203ENST00000520944 AKAP14Q86UN6 197 aa13.36□□□□□ -0.27
SNHG6-203ENST00000520944 OCC1Q8TAD7 63 aa13.36□□□□□ -0.27
SNHG6-203ENST00000520944 REG3AQ06141 175 aa13.35□□□□□ -0.27
SNHG6-203ENST00000520944 RNASE7Q9H1E1 156 aaKnown RBP13.35□□□□□ -0.27
SNHG6-203ENST00000520944 UBE2L6O14933 153 aa13.34□□□□□ -0.27
SNHG6-203ENST00000520944 BLOC1S1P78537 153 aa13.34□□□□□ -0.27
SNHG6-203ENST00000520944 DGAT2L7PQ6IED9 249 aa13.34□□□□□ -0.27
SNHG6-203ENST00000520944 PGLYRP4Q96LB8 373 aa13.34□□□□□ -0.27
SNHG6-203ENST00000520944 A0A1B0GUV1 79 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 K7EN84 100 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 PRSS1P07477 247 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 COTL1Q14019 142 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 SMIM15Q7Z3B0 74 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 CIRBP-AS1Q8TBR5 109 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 CNFNQ9BYD5 112 aa13.33□□□□□ -0.28
SNHG6-203ENST00000520944 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms