RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 ESRGQ1W209 222 aa12.03□□□□□ -0.48
TRAM1-203ENST00000520700 FAM104BQ5XKR9 115 aa12.03□□□□□ -0.48
TRAM1-203ENST00000520700 MRPL54Q6P161 138 aaKnown RBP12.03□□□□□ -0.48
TRAM1-203ENST00000520700 LYPD5Q6UWN5 251 aa12.03□□□□□ -0.48
TRAM1-203ENST00000520700 NEXN-AS1Q8NBZ9 246 aa12.03□□□□□ -0.48
TRAM1-203ENST00000520700 LCE6AA0A183 80 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 GAGE12JA6NER3 117 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 CAMPP49913 170 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 UBE2D3P61077 147 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 UBE2D2P62837 147 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 GAGE1Q13065 139 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 GAGE4Q13068 117 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 GAGE5Q13069 117 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 GAGE13Q4V321 117 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 ATP6V0E2Q8NHE4 81 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 ZNRF2Q8NHG8 242 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 MRAP2Q96G30 205 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 NIT2Q9NQR4 276 aa12.02□□□□□ -0.49
TRAM1-203ENST00000520700 AMN1Q8IY45 258 aa12.01□□□□□ -0.49
TRAM1-203ENST00000520700 UPK3BQ9BT76 320 aa12.01□□□□□ -0.49
TRAM1-203ENST00000520700 LINC00588Q9Y4M8 146 aa12.01□□□□□ -0.49
TRAM1-203ENST00000520700 KMT2CQ8NEZ4 4911 aaKnown RBP12.01□□□□□ -0.49
TRAM1-203ENST00000520700 GTSF1LQ9H1H1 148 aa12□□□□□ -0.49
TRAM1-203ENST00000520700 MRPS16Q9Y3D3 137 aaKnown RBP12□□□□□ -0.49
TRAM1-203ENST00000520700 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
TRAM1-203ENST00000520700 TNFRSF18Q9Y5U5 241 aa11.99□□□□□ -0.49
TRAM1-203ENST00000520700 PPP1R17O96001 155 aa11.98□□□□□ -0.49
TRAM1-203ENST00000520700 COX19Q49B96 90 aa11.98□□□□□ -0.49
TRAM1-203ENST00000520700 ATRAIDQ6UW56 229 aa11.98□□□□□ -0.49
TRAM1-203ENST00000520700 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
TRAM1-203ENST00000520700 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
TRAM1-203ENST00000520700 TRAV26-2A0A0B4J265 109 aa11.97□□□□□ -0.49
TRAM1-203ENST00000520700 LY6G6CO95867 125 aa11.97□□□□□ -0.49
TRAM1-203ENST00000520700 MRPL51Q4U2R6 128 aaKnown RBP11.97□□□□□ -0.49
TRAM1-203ENST00000520700 UBE2DNLQ8IWF7 75 aa11.97□□□□□ -0.49
TRAM1-203ENST00000520700 URGCP-MRPS24S4R325 110 aa11.97□□□□□ -0.49
TRAM1-203ENST00000520700 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
TRAM1-203ENST00000520700 PPBPP02775 128 aa11.96□□□□□ -0.49
TRAM1-203ENST00000520700 TMEM97Q5BJF2 176 aa11.96□□□□□ -0.49
TRAM1-203ENST00000520700 LELP1Q5T871 98 aa11.96□□□□□ -0.49
TRAM1-203ENST00000520700 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.96□□□□□ -0.49
TRAM1-203ENST00000520700 LYSTQ99698 3801 aa11.96□□□□□ -0.5
TRAM1-203ENST00000520700 RYR2Q92736 4967 aa11.95□□□□□ -0.5
TRAM1-203ENST00000520700 ELOBQ15370 118 aa11.95□□□□□ -0.5
TRAM1-203ENST00000520700 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
TRAM1-203ENST00000520700 GNB1LQ9BYB4 327 aa11.95□□□□□ -0.5
TRAM1-203ENST00000520700 PHOX2AO14813 284 aa11.94□□□□□ -0.5
TRAM1-203ENST00000520700 YPEL4Q96NS1 127 aa11.94□□□□□ -0.5
TRAM1-203ENST00000520700 SMCO4Q9NRQ5 59 aa11.94□□□□□ -0.5
TRAM1-203ENST00000520700 DNAH6Q9C0G6 4158 aa11.93□□□□□ -0.5
TRAM1-203ENST00000520700 GAS8-AS1O95177 125 aa11.93□□□□□ -0.5
TRAM1-203ENST00000520700 CKS2P33552 79 aa11.93□□□□□ -0.5
TRAM1-203ENST00000520700 OR10J3Q5JRS4 329 aa11.93□□□□□ -0.5
TRAM1-203ENST00000520700 NRACQ8N912 160 aa11.93□□□□□ -0.5
TRAM1-203ENST00000520700 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
TRAM1-203ENST00000520700 HLA-DQA1P01909 254 aa11.92□□□□□ -0.5
TRAM1-203ENST00000520700 RPS10P46783 165 aaKnown RBP11.92□□□□□ -0.5
TRAM1-203ENST00000520700 POLR2KP53803 58 aaKnown RBP11.92□□□□□ -0.5
TRAM1-203ENST00000520700 C20orf78Q9BR46 151 aa11.92□□□□□ -0.5
TRAM1-203ENST00000520700 Q9H8V8 135 aa11.92□□□□□ -0.5
TRAM1-203ENST00000520700 ST20Q9HBF5 79 aa11.92□□□□□ -0.5
TRAM1-203ENST00000520700 HYDINQ4G0P3 5121 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 TRBV6-8A0A0A6YYG3 113 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 MT-ND6P03923 174 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 RPL32P62910 135 aaKnown RBP11.91□□□□□ -0.5
TRAM1-203ENST00000520700 ORMDL3Q8N138 153 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
TRAM1-203ENST00000520700 TGIF2-C20orf24A0A0A6YYL0 155 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 TRBV27A0A0K0K1C4 114 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 D6R8Y8 96 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 K7EP13 123 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 NTM-AS1Q6ZSK4 140 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 TMEM70Q9BUB7 260 aa11.9□□□□□ -0.5
TRAM1-203ENST00000520700 IGHV3-38A0A0C4DH36 116 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 PRSS47A8MTI9 375 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 SIVA1O15304 175 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 NCR2O95944 276 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 DNAH10OSP0CZ25 163 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 SUMO2P61956 95 aaKnown RBP11.89□□□□□ -0.51
TRAM1-203ENST00000520700 IQCJQ1A5X6 159 aa11.89□□□□□ -0.51
TRAM1-203ENST00000520700 I3L3M4 83 aa11.88□□□□□ -0.51
TRAM1-203ENST00000520700 VCYO14598 125 aa11.88□□□□□ -0.51
TRAM1-203ENST00000520700 APCSP02743 223 aa11.88□□□□□ -0.51
TRAM1-203ENST00000520700 PRELID3AQ96N28 172 aa11.88□□□□□ -0.51
TRAM1-203ENST00000520700 S100A1P23297 94 aa11.87□□□□□ -0.51
TRAM1-203ENST00000520700 COTL1Q14019 142 aa11.87□□□□□ -0.51
TRAM1-203ENST00000520700 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
TRAM1-203ENST00000520700 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
TRAM1-203ENST00000520700 CBLN2Q8IUK8 224 aa11.87□□□□□ -0.51
TRAM1-203ENST00000520700 TRBV25-1A0A075B6N4 114 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 IGHV1-24A0A0C4DH33 117 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 NPYP01303 97 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 PMCHP20382 165 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 Q6ZR54 194 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
TRAM1-203ENST00000520700 NBDYA0A0U1RRE5 68 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms