RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 AKAP13Q12802 2813 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 OXTP01178 125 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 IGHV3-11P01762 117 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 S100A7L2Q5SY68 101 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 MUSTN1Q8IVN3 82 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 MYO9AB2RTY4 2548 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 IGF2RP11717 2491 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 A8MZ25 164 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 ATXN8Q156A1 80 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 LINC01620Q4KN68 170 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 FANCD2OSQ96PS1 177 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 FAM215AQ9Y5M1 114 aa7.68□□□□□ -1.18
PDGFRB-207ENST00000520579 IGHG4P01861 327 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 ZNF883P0CG24 379 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 IGLV2-18A0A075B6J9 118 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 A0A0J9YY99 117 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 TMEM89A2RUT3 159 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 CRYGDP07320 174 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 LINC01560Q8TB33 94 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 UBE2D3P61077 147 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 UBE2D2P62837 147 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 RNASE6Q93091 150 aaKnown RBP7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 NCOR2Q9Y618 2525 aa7.67□□□□□ -1.18
PDGFRB-207ENST00000520579 CTSGP08311 255 aa7.66□□□□□ -1.18
PDGFRB-207ENST00000520579 SYNJ2BPP57105 145 aa7.66□□□□□ -1.18
PDGFRB-207ENST00000520579 ORMDL2Q53FV1 153 aa7.66□□□□□ -1.18
PDGFRB-207ENST00000520579 NUP37Q8NFH4 326 aa7.66□□□□□ -1.18
PDGFRB-207ENST00000520579 NEXN-AS1Q8NBZ9 246 aa7.66□□□□□ -1.18
PDGFRB-207ENST00000520579 CDSNQ15517 529 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 PIEZO1Q92508 2521 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 SHISA9B4DS77 424 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 IGHG3P01860 377 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 LINC00311Q8N616 119 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 C20orf173Q96LM9 149 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 C9orf85Q96MD7 179 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.18
PDGFRB-207ENST00000520579 PDE6HQ13956 83 aa7.65□□□□□ -1.19
PDGFRB-207ENST00000520579 ZNF575Q86XF7 245 aa7.65□□□□□ -1.19
PDGFRB-207ENST00000520579 LINC01561Q8N1V8 128 aa7.65□□□□□ -1.19
PDGFRB-207ENST00000520579 CHD8Q9HCK8 2581 aa7.65□□□□□ -1.19
PDGFRB-207ENST00000520579 CELSR1Q9NYQ6 3014 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 UBE2D1P51668 147 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 TIRAPP58753 221 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 DPM3Q9P2X0 92 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 TLN2Q9Y4G6 2542 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 ATOX1O00244 68 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 PRRC2AP48634 2157 aaKnown RBP7.64□□□□□ -1.19
PDGFRB-207ENST00000520579 CRYGAP11844 174 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 RHOHQ15669 191 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 PRORYQ9H606 182 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 PEMTQ9UBM1 199 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 U3KQE9 123 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 NDUFC2O95298 119 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 IGLV1-47P01700 117 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 LINC01559Q495D7 138 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 TMEM243Q9BU79 118 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 LINC00574Q9H8X3 128 aa7.63□□□□□ -1.19
PDGFRB-207ENST00000520579 E7EQL1 145 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 F8W735 103 aaPredicted RBP7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 IGHV3-30P01768 117 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 IGHV3-30-5P0DP03 117 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 DPH3P1Q9H4G8 78 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TRBV7-7A0A0K0K1E9 115 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 CD59P13987 128 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TMEM30BQ3MIR4 351 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TOMM6Q96B49 74 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 USP9YO00507 2555 aaPredicted RBP7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TRAV12-2A0A075B6T6 113 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TRBV6-1A0A0K0K1D8 114 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 METTL26Q96S19 204 aa7.62□□□□□ -1.19
PDGFRB-207ENST00000520579 TRIAP1O43715 76 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 COX6CP09669 75 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 C6orf226Q5I0X4 101 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 IGLV11-55A0A075B6I3 123 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 SDHAF1A6NFY7 115 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 IGHV3-33P01772 117 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 UBE2E1P51965 193 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 PIFOQ8TCI5 191 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 TRBV10-2A0A0K0K1G8 114 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 KNCNA6PVL3 124 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 RBM3P98179 157 aaKnown RBP7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 SBSPONQ8IVN8 264 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 POM121L12Q8N7R1 296 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 SLC50A1Q9BRV3 221 aa7.61□□□□□ -1.19
PDGFRB-207ENST00000520579 A0A0G2JNJ9 132 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 Q9UFV3 132 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 IGKV3D-7A0A0C4DH55 119 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 ATP6V0E1O15342 81 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 CLPSL1A2RUU4 121 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 BUB3O43684 328 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 JMJD1CQ15652 2540 aa7.6□□□□□ -1.19
PDGFRB-207ENST00000520579 TSHBP01222 138 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 C4orf48Q5BLP8 95 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 KLK9Q9UKQ9 250 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 TRAV12-1A0A0B4J245 112 aa7.59□□□□□ -1.19
PDGFRB-207ENST00000520579 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms