RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 WIPF3A6NGB9 483 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 TRBV27A0A0K0K1C4 114 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 DEFB112Q30KQ8 113 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 EFNA2O43921 213 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 GTSF1Q8WW33 167 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 C5orf24Q7Z6I8 188 aa12.14□□□□□ -0.47
UBR5-207ENST00000520539 CPAMD8Q8IZJ3 1885 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 CXCL6P80162 114 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 GYPEP15421 78 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 IGFL4Q6B9Z1 124 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.13□□□□□ -0.47
UBR5-207ENST00000520539 SP5Q6BEB4 398 aaPredicted RBP12.13□□□□□ -0.47
UBR5-207ENST00000520539 UFSP1Q6NVU6 142 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 AGPAT4-IT1Q9H0P7 198 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 CCL18P55774 89 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 WDR90Q96KV7 1748 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 Q6ZRM9 215 aa12.13□□□□□ -0.47
UBR5-207ENST00000520539 M0QXV9 152 aa12.12□□□□□ -0.47
UBR5-207ENST00000520539 ZNF726P1Q15940 193 aa12.12□□□□□ -0.47
UBR5-207ENST00000520539 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
UBR5-207ENST00000520539 WFDC10BQ8IUB3 73 aa12.11□□□□□ -0.47
UBR5-207ENST00000520539 SPTBN4Q9H254 2564 aa12.11□□□□□ -0.47
UBR5-207ENST00000520539 GGNQ86UU5 652 aa12.11□□□□□ -0.47
UBR5-207ENST00000520539 TRBV30A0A0K0K1B3 111 aa12.11□□□□□ -0.47
UBR5-207ENST00000520539 NCR3O14931 201 aa12.1□□□□□ -0.47
UBR5-207ENST00000520539 RAI1Q7Z5J4 1906 aaPredicted RBP12.1□□□□□ -0.47
UBR5-207ENST00000520539 PATE3B3GLJ2 98 aa12.09□□□□□ -0.47
UBR5-207ENST00000520539 ZNF706Q9Y5V0 76 aaPredicted RBP12.09□□□□□ -0.47
UBR5-207ENST00000520539 TRAV7A0A075B6U4 112 aa12.09□□□□□ -0.47
UBR5-207ENST00000520539 IGLV3-19P01714 112 aa12.09□□□□□ -0.47
UBR5-207ENST00000520539 C5orf38Q86SI9 138 aa12.08□□□□□ -0.47
UBR5-207ENST00000520539 C9orf85Q96MD7 179 aa12.08□□□□□ -0.47
UBR5-207ENST00000520539 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 MIR7-3HGQ8N6C7 128 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 RPL39LQ96EH5 51 aaKnown RBP12.08□□□□□ -0.48
UBR5-207ENST00000520539 WFDC10AQ9H1F0 79 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 PRR20EP86478 221 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 PRR20CP86479 221 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 PRR20DP86480 221 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 PRR20BP86481 221 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 PRR20AP86496 221 aa12.08□□□□□ -0.48
UBR5-207ENST00000520539 TRBV6-1A0A0K0K1D8 114 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 LINC00694P0DN24 101 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 IGHV3-30-3P0DP02 117 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 ZNF491Q8N8L2 437 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 PRORYQ9H606 182 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 USP9XQ93008 2570 aaPredicted RBP12.07□□□□□ -0.48
UBR5-207ENST00000520539 WT1-ASQ06250 92 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 Q6ZQT7 251 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 MUC7Q8TAX7 377 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 SPRR3Q9UBC9 169 aa12.07□□□□□ -0.48
UBR5-207ENST00000520539 SPART-AS1P0CW21 52 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 A0A087WV48 116 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 HRCT1Q6UXD1 115 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 A0A0G2JRQ6 117 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 RBX1P62877 108 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 LINC00526Q96FQ7 95 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 Q6JHZ5 121 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 Q8N976 141 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 TRBV10-1A0A0K0K1A3 114 aa12.06□□□□□ -0.48
UBR5-207ENST00000520539 NANOS2P60321 138 aaKnown RBP12.06□□□□□ -0.48
UBR5-207ENST00000520539 MSMBP08118 114 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 SP7Q8TDD2 431 aaPredicted RBP12.05□□□□□ -0.48
UBR5-207ENST00000520539 A0A0J9YXV3 536 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 IBA57-AS1B1ANH7 110 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 CCKP06307 115 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 LIMD2Q9BT23 127 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 SNURFQ9Y675 71 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 TDRG1Q3Y452 100 aa12.05□□□□□ -0.48
UBR5-207ENST00000520539 PRYO14603 147 aa12.04□□□□□ -0.48
UBR5-207ENST00000520539 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
UBR5-207ENST00000520539 PRR4Q16378 134 aa12.04□□□□□ -0.48
UBR5-207ENST00000520539 IGHV4-59P01825 116 aa12.04□□□□□ -0.48
UBR5-207ENST00000520539 CDPF1Q6NVV7 123 aa12.04□□□□□ -0.48
UBR5-207ENST00000520539 BRD3OSQ6XYD6 125 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 TMEM223A0PJW6 202 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 CCDC179H3BU77 68 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 GP9P14770 177 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 UBE2D3P61077 147 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 Q9HAA7 133 aa12.03□□□□□ -0.48
UBR5-207ENST00000520539 TP73-AS1Q9UF72 201 aa12.02□□□□□ -0.49
UBR5-207ENST00000520539 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
UBR5-207ENST00000520539 FOXL2NBQ6ZUU3 175 aa12.01□□□□□ -0.49
UBR5-207ENST00000520539 CSRP2Q16527 193 aa12.01□□□□□ -0.49
UBR5-207ENST00000520539 UBE2D1P51668 147 aa12.01□□□□□ -0.49
UBR5-207ENST00000520539 IGKV1-6A0A0C4DH72 117 aa12□□□□□ -0.49
UBR5-207ENST00000520539 COX17Q14061 63 aa12□□□□□ -0.49
UBR5-207ENST00000520539 NAV2Q8IVL1 2488 aa12□□□□□ -0.49
UBR5-207ENST00000520539 TMEM263Q8WUH6 116 aaKnown RBP12□□□□□ -0.49
UBR5-207ENST00000520539 FAM19A5Q7Z5A7 132 aaPredicted RBP12□□□□□ -0.49
UBR5-207ENST00000520539 HHLA3Q9XRX5 114 aa12□□□□□ -0.49
UBR5-207ENST00000520539 RSPO4Q2I0M5 234 aaPredicted RBP11.99□□□□□ -0.49
UBR5-207ENST00000520539 MBD3L4A6NDZ8 208 aaPredicted RBP11.99□□□□□ -0.49
UBR5-207ENST00000520539 MBD3L3A6NE82 208 aaPredicted RBP11.99□□□□□ -0.49
UBR5-207ENST00000520539 MBD3L5A6NJ08 208 aaPredicted RBP11.99□□□□□ -0.49
UBR5-207ENST00000520539 MBD3L2Q8NHZ7 208 aaPredicted RBP11.99□□□□□ -0.49
UBR5-207ENST00000520539 A0A0G2JNJ9 132 aa11.99□□□□□ -0.49
UBR5-207ENST00000520539 TGFBR3LH3BV60 316 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms