RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 SMIM3Q9BZL3 60 aa4.86□□□□□ -1.63
CDKL3-203ENST00000519312 PRR34Q9NV39 138 aa4.86□□□□□ -1.63
CDKL3-203ENST00000519312 TRBV7-3A0A075B6L6 115 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 TRBV6-8A0A0A6YYG3 113 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 CRPP02741 224 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 STAG3L2P0CL84 134 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 STAG3L3P0CL85 134 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 S100A4P26447 101 aaKnown RBP4.85□□□□□ -1.63
CDKL3-203ENST00000519312 RPL36AP83881 106 aaKnown RBP4.85□□□□□ -1.63
CDKL3-203ENST00000519312 OR2G3Q8NGZ4 309 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 SFRP2Q96HF1 295 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 SGK494Q96LW2 274 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 LINC01600Q96MT4 127 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 MED28Q9H204 178 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 JPT2Q9H910 190 aa4.85□□□□□ -1.63
CDKL3-203ENST00000519312 A0A1W2PPV4 95 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 FABP5P3A8MUU1 101 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 EIF3GO75821 320 aaKnown RBP eCLIP4.84□□□□□ -1.63
CDKL3-203ENST00000519312 ARL14EPLP0DKL9 152 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 MPV17L2Q567V2 206 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 AQP10Q96PS8 301 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 WFDC1Q9HC57 220 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 EPDR1Q9UM22 224 aa4.84□□□□□ -1.63
CDKL3-203ENST00000519312 HLA-DQA1P01909 254 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 GIPP09681 153 aaPredicted RBP4.83□□□□□ -1.64
CDKL3-203ENST00000519312 CDC34P49427 236 aaPredicted RBP4.83□□□□□ -1.64
CDKL3-203ENST00000519312 RAB2AP61019 212 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 TMEM97Q5BJF2 176 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 PRR27Q6MZM9 219 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 PRNTQ86SH4 94 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 C15orf54Q8N8G6 183 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 OR11H4Q8NGC9 324 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 SPACA4Q8TDM5 124 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 PSMG3Q9BT73 122 aaPredicted RBP4.83□□□□□ -1.64
CDKL3-203ENST00000519312 TMEM167BQ9NRX6 74 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
CDKL3-203ENST00000519312 A0A087WYN8 130 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 A0A0J9YXV3 536 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 A0A1W2PRE2 83 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 B4DEV8 164 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 KRBOX1C9JBD0 128 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 H3BVH4 76 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 MBP02144 154 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 ANGP03950 147 aaKnown RBP4.82□□□□□ -1.64
CDKL3-203ENST00000519312 ARMS2P0C7Q2 107 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 GCHFRP30047 84 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 SERF2P84101 59 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 TWIST1Q15672 202 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 RGS21Q2M5E4 152 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 Q86TA4 180 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 INO80EQ8NBZ0 244 aaPredicted RBP4.82□□□□□ -1.64
CDKL3-203ENST00000519312 VAX2Q9UIW0 290 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 ARL2-SNX15V9GYD0 113 aa4.82□□□□□ -1.64
CDKL3-203ENST00000519312 IGHV3-64A0A075B6Q5 118 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 IGKV2D-30A0A075B6S6 120 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 TMEM262E9PQX1 116 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 HMGB3O15347 200 aaKnown RBP4.81□□□□□ -1.64
CDKL3-203ENST00000519312 ATP6V0CP27449 155 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 CRIP1P50238 77 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 RAB4BP61018 213 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 Q5BKY6 102 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 WDR73Q6P4I2 378 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 ZFP82Q8N141 532 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 TNFSF18Q9UNG2 199 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 PHLDA3Q9Y5J5 127 aa4.81□□□□□ -1.64
CDKL3-203ENST00000519312 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-203ENST00000519312 BORCS7-ASMTA0A0B4J1R7 106 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 TRAV8-4A0A0B4J246 113 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 TRBV6-1A0A0K0K1D8 114 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 PHOX2AO14813 284 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 CXorf1O96002 111 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 P01737 135 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 CXCL1P09341 107 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 GZMBP10144 247 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 TPT1P13693 172 aaKnown RBP4.8□□□□□ -1.64
CDKL3-203ENST00000519312 RBX1P62877 108 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 PRR3P79522 188 aaKnown RBP4.8□□□□□ -1.64
CDKL3-203ENST00000519312 NTM-AS1Q6ZSK4 140 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.8□□□□□ -1.64
CDKL3-203ENST00000519312 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 ZFP30Q9Y2G7 519 aa4.8□□□□□ -1.64
CDKL3-203ENST00000519312 FXYD6-FXYD2A0A087WZ82 144 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 M0R381 172 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 PEX7O00628 323 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 SH2D1AO60880 128 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 IQCJQ1A5X6 159 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 ZNF674Q2M3X9 581 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 RPL7L1Q6DKI1 246 aaKnown RBP4.79□□□□□ -1.64
CDKL3-203ENST00000519312 LINC00269Q8N2A0 174 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 HIST1H2BAQ96A08 127 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 CHCHD5Q9BSY4 110 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
CDKL3-203ENST00000519312 ACTR3CQ9C0K3 210 aaPredicted RBP4.79□□□□□ -1.64
CDKL3-203ENST00000519312 DPH3P1Q9H4G8 78 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 KIF25-AS1Q9Y6Z4 181 aa4.79□□□□□ -1.64
CDKL3-203ENST00000519312 TRAV34A0A0B4J273 112 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms