RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 NDUFA11Q86Y39 141 aa-1.19□□□□□ -2.6
PCM1-208ENST00000518877 TRAV2A0A0B4J234 112 aa-1.2□□□□□ -2.6
PCM1-208ENST00000518877 TRBV10-3A0A0K0K1G6 114 aa-1.2□□□□□ -2.6
PCM1-208ENST00000518877 SPCS2Q15005 226 aa-1.2□□□□□ -2.6
PCM1-208ENST00000518877 CDC26Q8NHZ8 85 aa-1.2□□□□□ -2.6
PCM1-208ENST00000518877 PCBD2Q9H0N5 130 aa-1.2□□□□□ -2.6
PCM1-208ENST00000518877 NOP16Q9Y3C1 178 aaKnown RBP-1.2□□□□□ -2.6
PCM1-208ENST00000518877 XIRP1Q702N8 1843 aaKnown RBP-1.2□□□□□ -2.6
PCM1-208ENST00000518877 MUC22E2RYF6 1773 aaPredicted RBP-1.21□□□□□ -2.6
PCM1-208ENST00000518877 LAMC1P11047 1609 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 M0R2T5 61 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 E2F6O75461 281 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 EDDM3BP56851 147 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 TMEM244Q5VVB8 128 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 MNS1Q8NEH6 495 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 ATP6V0E2Q8NHE4 81 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 WFDC6Q9BQY6 131 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 SPCS1Q9Y6A9 102 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 RYR1P21817 5038 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 URB1O60287 2271 aaKnown RBP-1.21□□□□□ -2.6
PCM1-208ENST00000518877 RYR3Q15413 4870 aa-1.21□□□□□ -2.6
PCM1-208ENST00000518877 PARP14Q460N5 1801 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 C10orf71Q711Q0 1435 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 TRAV1-2A0A0B4J238 106 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 CLPSL1A2RUU4 121 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 OR9Q1Q8NGQ5 310 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 ERG28Q9UKR5 140 aa-1.22□□□□□ -2.6
PCM1-208ENST00000518877 PIN1P1O15428 100 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 BCE1O60756 84 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 HLA-DRB4P13762 266 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 CLLU1Q5K131 121 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 SPAG11AQ6PDA7 123 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 ATPIF1Q9UII2 106 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 LSM2Q9Y333 95 aaKnown RBP-1.23□□□□□ -2.61
PCM1-208ENST00000518877 HLA-DRB4X5D2U9 266 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 MUC17Q685J3 4493 aa-1.23□□□□□ -2.61
PCM1-208ENST00000518877 PLXNB2O15031 1838 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 PCNX1Q96RV3 2341 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 BIRC6Q9NR09 4857 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 TMEM128Q5BJH2 165 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 ATP11AUNQ6ZP68 121 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 BANF2Q9H503 90 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 NDUFA12Q9UI09 145 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 SCP2D1Q9UJQ7 156 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 IBTKQ9P2D0 1353 aaPredicted RBP-1.24□□□□□ -2.61
PCM1-208ENST00000518877 SIPA1L3O60292 1781 aaPredicted RBP-1.24□□□□□ -2.61
PCM1-208ENST00000518877 OVOS2A0A0G2JMS6 1433 aa-1.24□□□□□ -2.61
PCM1-208ENST00000518877 APOC4-APOC2K7ER74 178 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 PFDN1O60925 122 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 PAEPP09466 180 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 DCDP81605 110 aaKnown RBP-1.25□□□□□ -2.61
PCM1-208ENST00000518877 TMEM35BQ8NCS4 154 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 C10orf82Q8WW14 230 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 CALML5Q9NZT1 146 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 TSC2P49815 1807 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 ROCK1Q13464 1354 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 UHRF1BP1LA0JNW5 1464 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 IQSEC2Q5JU85 1478 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 FAT3Q8TDW7 4589 aa-1.25□□□□□ -2.61
PCM1-208ENST00000518877 FXYD6-FXYD2A0A087WZ82 144 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 LINC01545Q5VT33 79 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 PPP1R2P3Q6NXS1 205 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 DNAH3Q8TD57 4116 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 PKHD1L1Q86WI1 4243 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 KIAA1109Q2LD37 5005 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 IFT172Q9UG01 1749 aa-1.26□□□□□ -2.61
PCM1-208ENST00000518877 CCDC179H3BU77 68 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 J3QLW9 94 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 DPM2O94777 84 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 SAMD13Q5VXD3 122 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 SMPXQ9UHP9 88 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 ERCC6Q03468 1493 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 WNK3Q9BYP7 1800 aa-1.27□□□□□ -2.61
PCM1-208ENST00000518877 PI4KAP42356 2102 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 E5RI56 91 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 M0R2P5 195 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 SMIM24O75264 130 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 RBP4P02753 201 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 SPRR1BP22528 89 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 Q5VV11 94 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 TOMM20LQ6UXN7 152 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 OR8I2Q8N0Y5 310 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 TP53AIP1Q9HCN2 124 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 SCN3BQ9NY72 215 aa-1.28□□□□□ -2.61
PCM1-208ENST00000518877 SYNJ1O43426 1573 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 BORCS7-ASMTA0A0B4J1R7 106 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 NPFFO15130 113 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 SPINK4O60575 86 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 UBE2D1P51668 147 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 MYH13Q9UKX3 1938 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 EPG5Q9HCE0 2579 aa-1.29□□□□□ -2.62
PCM1-208ENST00000518877 BICRAQ9NZM4 1560 aa-1.3□□□□□ -2.62
PCM1-208ENST00000518877 J3KT08 172 aa-1.3□□□□□ -2.62
PCM1-208ENST00000518877 TNFSF15O95150 251 aa-1.3□□□□□ -2.62
PCM1-208ENST00000518877 S100A3P33764 101 aa-1.3□□□□□ -2.62
PCM1-208ENST00000518877 RPS28P62857 69 aaKnown RBP-1.3□□□□□ -2.62
PCM1-208ENST00000518877 CFAP126Q5VTH2 177 aa-1.3□□□□□ -2.62
PCM1-208ENST00000518877 USP9YO00507 2555 aaPredicted RBP-1.3□□□□□ -2.62
PCM1-208ENST00000518877 PKD1P98161 4303 aa-1.31□□□□□ -2.62
PCM1-208ENST00000518877 KDM3BQ7LBC6 1761 aa-1.31□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms