RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FXYD6P3P58550 94 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 PIGYQ3MUY2 71 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 KRTAP13-3Q3SY46 172 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 LYPD5Q6UWN5 251 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 SLC35F6Q8N357 371 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 DAND5Q8N907 189 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 TMEM167AQ8TBQ9 72 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 ZC2HC1AQ96GY0 325 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 GINS3Q9BRX5 216 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 TTTY10Q9BZA0 68 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 SLC35B3Q9H1N7 401 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 DCSTAMPQ9H295 470 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 JPT1Q9UK76 154 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 PRELID1Q9Y255 219 aa2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 TIMM8BQ9Y5J9 83 aaPredicted RBP2.46□□□□□ -2.02
HMGB1P23-201ENST00000518743 TMEM14DPA8MWL7 114 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 IGHV3-30P01768 117 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 IGHV3-33P01772 117 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 IGHV3-30-5P0DP03 117 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 FGF6P10767 208 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 HLA-DRB4P13762 266 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 GZMMP51124 257 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 POLR2JP52435 117 aaKnown RBP2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 GTF2A1P52655 376 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 GUK1Q16774 197 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 IAH1Q2TAA2 248 aaPredicted RBP2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 MCFD2Q8NI22 146 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 DGCR14Q96DF8 476 aaKnown RBP2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 SFRP2Q96HF1 295 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 TAF9BQ9HBM6 251 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 HLA-DRB4X5D2U9 266 aa2.45□□□□□ -2.02
HMGB1P23-201ENST00000518743 IBA57-AS1B1ANH7 110 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 CYB5BO43169 146 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 YPEL1O60688 119 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 NAPSAO96009 420 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 SRP19P09132 144 aaKnown RBP2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 EIF2B2P49770 351 aaKnown RBP2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 CDK10Q15131 360 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 RTL8BQ17RB0 113 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 LPCAT3Q6P1A2 487 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 ATP6V0E2Q8NHE4 81 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 OTOSQ8NHW6 89 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 YPEL2Q96QA6 119 aa2.44□□□□□ -2.02
HMGB1P23-201ENST00000518743 TRAV1-1A0A0B4J248 108 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 INMT-MINDY4F8WBC2 141 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 LST1O00453 97 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 IDO1P14902 403 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 GPX2P18283 190 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 SRIP30626 198 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 XCL1P47992 114 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 UBE2D1P51668 147 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 DEFB1P60022 68 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 PSG9Q00887 426 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 GDF5OSQ5U4N7 250 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 Q6ZS49 121 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 LINC00304Q8N9R0 145 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 OR10K1Q8NGX5 313 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 SMCR5Q8TEV8 140 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 DCANP1Q8TF63 244 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 KRTAP4-1Q9BYQ7 146 aa2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 UTP11Q9Y3A2 253 aaKnown RBP2.43□□□□□ -2.02
HMGB1P23-201ENST00000518743 MDN1Q9NU22 5596 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 TRGV2A0A075B6R0 118 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 PLA2G10O15496 165 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 CSN1S1P47710 185 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 SERPINB10P48595 397 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 MIAQ16674 131 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 ANKRD29Q8N6D5 301 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 OR10D4PQ8NGN7 298 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 DYDC1Q8WWB3 177 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 PP6455Q8WZ26 134 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 LINC00052Q96N35 136 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 RETNLBQ9BQ08 111 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 ABRACLQ9P1F3 81 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 OR52A1Q9UKL2 312 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 PRELID3BQ9Y3B1 194 aa2.42□□□□□ -2.02
HMGB1P23-201ENST00000518743 TRBV20OR9-2A0A075B6H5 130 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 IGKV1-9A0A0C4DH69 117 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 A0A1W2PNM2 257 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 C19orf71A6NCJ1 209 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 RIIAD1A6NNX1 92 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 A8MUN3 132 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 MCRIP1C9JLW8 97 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 PDE6DO43924 150 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 CRYZL1O95825 349 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 IFNGP01579 166 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 BPGMP07738 259 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 CTSGP08311 255 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 SAA1P0DJI8 122 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 B2MP61769 119 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 RPL30P62888 115 aaKnown RBP2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 LINC01556Q5JQF7 62 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 LINC01590Q5TEZ4 76 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 DHFR2Q86XF0 187 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 PXT1Q8NFP0 134 aa2.41□□□□□ -2.02
HMGB1P23-201ENST00000518743 OR4X1Q8NH49 305 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms