RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 C5orf38Q86SI9 138 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 SBSPONQ8IVN8 264 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 DYNAPQ8N1N2 210 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 LINC00301Q8NCQ3 95 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 CCL4L1Q8NHW4 92 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 Q96M85 177 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 IMMP2LQ96T52 175 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 TTTY13Q9BZ97 58 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 DYSFO75923 2080 aa1.92□□□□□ -2.1
VPS13B-207ENST00000518569 SMG1Q96Q15 3661 aaKnown RBP1.92□□□□□ -2.1
VPS13B-207ENST00000518569 PARP14Q460N5 1801 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 KIAA1671Q9BY89 1806 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 AKAP13Q12802 2813 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 C2orf16Q68DN1 1984 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 A0A087WXM4 84 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 TRBV7-7A0A0K0K1E9 115 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 A0A1W2PQD3 144 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 hDV103S1A0JD37 113 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 RBAKDNA6NC62 111 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 NAP1L6A6NFF2 107 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 CPSF4O95639 269 aaKnown RBP1.91□□□□□ -2.1
VPS13B-207ENST00000518569 IGKV1D-33P01593 117 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 IGKV1-33P01594 117 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 NMBP08949 121 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 SLC25A6P12236 298 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 Q5BKY6 102 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 RPL7L1Q6DKI1 246 aaKnown RBP1.91□□□□□ -2.1
VPS13B-207ENST00000518569 SDIM1Q6ZPB5 146 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 ARPINQ7Z6K5 226 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 Q8N2B8 174 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 OR10AG1Q8NH19 301 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 MYOZ3Q8TDC0 251 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 C10orf105Q8TEF2 133 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 PPDPFLQ8WWR9 84 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 TSLPQ969D9 159 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 LSM10Q969L4 123 aaKnown RBP1.91□□□□□ -2.1
VPS13B-207ENST00000518569 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 CST11Q9H112 138 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 C14orf132Q9NPU4 83 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 SPCS1Q9Y6A9 102 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 ICOSQ9Y6W8 199 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 LOC400499M0QZD8 3231 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 TEP1Q99973 2627 aaKnown RBP1.91□□□□□ -2.1
VPS13B-207ENST00000518569 MICAL3Q7RTP6 2002 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 MYH1P12882 1939 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 LOXHD1Q8IVV2 1947 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 PIEZO2Q9H5I5 2752 aa1.91□□□□□ -2.1
VPS13B-207ENST00000518569 CEP295Q9C0D2 2601 aa1.9□□□□□ -2.1
VPS13B-207ENST00000518569 MYO5AQ9Y4I1 1855 aaKnown RBP1.9□□□□□ -2.1
VPS13B-207ENST00000518569 LAMA1P25391 3075 aa1.9□□□□□ -2.1
VPS13B-207ENST00000518569 CABIN1Q9Y6J0 2220 aa1.9□□□□□ -2.1
VPS13B-207ENST00000518569 PCM1Q15154 2024 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 TRAV14DV4A0A0A6YYC5 116 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 A8MWP4 228 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 E7EQL1 145 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 H3BMM0 161 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 H3BPC8 53 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 LECT2O14960 151 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 ZNF737O75373 536 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 CFDP00746 253 aaPredicted RBP1.9□□□□□ -2.11
VPS13B-207ENST00000518569 IGKCP01834 107 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 RNASE2P10153 161 aaKnown RBP1.9□□□□□ -2.11
VPS13B-207ENST00000518569 IL9P15248 144 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 FAUP35544 74 aaKnown RBP1.9□□□□□ -2.11
VPS13B-207ENST00000518569 SSR2P43308 183 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 SMIM11AP58511 58 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 CCL8P80075 99 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 ZNF117Q03924 483 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 FUT5Q11128 374 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 FOXF1Q12946 379 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 PMCHL1Q16048 86 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 IGFBP7Q16270 282 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 SPANXN5Q5MJ07 72 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 LYZL1Q6UWQ5 148 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 TMEM136Q6ZRR5 245 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 MIR7-3HGQ8N6C7 128 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 SPANXA2-OT1Q8N9U9 137 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 AQP3Q92482 292 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 UBE2WQ96B02 151 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 DSCR8Q96T75 97 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 SLC50A1Q9BRV3 221 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 DPH3P1Q9H4G8 78 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 HELZ2Q9BYK8 2649 aaKnown RBP1.9□□□□□ -2.11
VPS13B-207ENST00000518569 MYO18BQ8IUG5 2567 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 USP9XQ93008 2570 aaPredicted RBP1.9□□□□□ -2.11
VPS13B-207ENST00000518569 IGF2RP11717 2491 aa1.9□□□□□ -2.11
VPS13B-207ENST00000518569 LAMA5O15230 3695 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 DOCK9Q9BZ29 2069 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 DMXL2Q8TDJ6 3036 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 COL27A1Q8IZC6 1860 aaPredicted RBP1.89□□□□□ -2.11
VPS13B-207ENST00000518569 PLXNA4Q9HCM2 1894 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 IGHV3-15A0A0B4J1V0 119 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 TRBV10-2A0A0K0K1G8 114 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 TRGV3P03979 118 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 PIRTP0C851 137 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 CGB3P0DN86 165 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 CGB7P0DN87 165 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 IGLC2P0DOY2 106 aa1.89□□□□□ -2.11
VPS13B-207ENST00000518569 IGLC3P0DOY3 106 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms