RNA–Protein interactions for RNA: ENST00000517980.5

CTNNA1-206, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-206ENST00000517980 CIRBP-AS1Q8TBR5 109 aa11.27□□□□□ -0.61
CTNNA1-206ENST00000517980 CXCL1P09341 107 aa11.26□□□□□ -0.61
CTNNA1-206ENST00000517980 GZMBP10144 247 aa11.26□□□□□ -0.61
CTNNA1-206ENST00000517980 ZNF345Q14585 488 aa11.26□□□□□ -0.61
CTNNA1-206ENST00000517980 A0A0D9SG52 128 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 KANTRA0A1W2PQU2 76 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 HMSDA8MTL9 139 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 CRPP02741 224 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 OR5AL1P0C617 328 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 RPL35P42766 123 aaKnown RBP11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 DEFB104AQ8WTQ1 72 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 DERL1Q9BUN8 251 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
CTNNA1-206ENST00000517980 BCL2L11O43521 198 aa11.24□□□□□ -0.61
CTNNA1-206ENST00000517980 GAGE6Q13070 117 aa11.24□□□□□ -0.61
CTNNA1-206ENST00000517980 CLPSL2Q6UWE3 100 aa11.24□□□□□ -0.61
CTNNA1-206ENST00000517980 USP17L23D6RBM5 183 aa11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 HLA-DQA1P01909 254 aa11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 SMIM17P0DL12 118 aa11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 TPPP3Q9BW30 176 aa11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 GNG13Q9P2W3 67 aa11.23□□□□□ -0.61
CTNNA1-206ENST00000517980 RAB19A4D1S5 217 aa11.22□□□□□ -0.61
CTNNA1-206ENST00000517980 KRTAP29-1A8MX34 341 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-206ENST00000517980 KRTAP10-4P60372 401 aaPredicted RBP11.22□□□□□ -0.61
CTNNA1-206ENST00000517980 C14orf177Q52M58 125 aa11.22□□□□□ -0.61
CTNNA1-206ENST00000517980 LRP1Q07954 4544 aaKnown RBP11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 PRSS1P07477 247 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 MGPP08493 103 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 RBX1P62877 108 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 LINC00269Q8N2A0 174 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 VAX2Q9UIW0 290 aa11.21□□□□□ -0.61
CTNNA1-206ENST00000517980 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
CTNNA1-206ENST00000517980 MIAQ16674 131 aa11.19□□□□□ -0.62
CTNNA1-206ENST00000517980 CENPWQ5EE01 88 aa11.19□□□□□ -0.62
CTNNA1-206ENST00000517980 KRTAP26-1Q6PEX3 210 aa11.19□□□□□ -0.62
CTNNA1-206ENST00000517980 DAZAP1Q96EP5 407 aaKnown RBP11.19□□□□□ -0.62
CTNNA1-206ENST00000517980 AP1S3Q96PC3 154 aa11.19□□□□□ -0.62
CTNNA1-206ENST00000517980 TRBV25-1A0A075B6N4 114 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 M0QY20 66 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 IGLC6P0CF74 106 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 EIF5AP63241 154 aaKnown RBP11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 TMEM97Q5BJF2 176 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 SUMO4Q6EEV6 95 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 FER1L6-AS1Q8NA97 138 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 C11orf52Q96A22 123 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 MANBALQ9NQG1 85 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 PRR34Q9NV39 138 aa11.18□□□□□ -0.62
CTNNA1-206ENST00000517980 IGLV10-54A0A075B6I4 117 aa11.17□□□□□ -0.62
CTNNA1-206ENST00000517980 PKIAP61925 76 aa11.17□□□□□ -0.62
CTNNA1-206ENST00000517980 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
CTNNA1-206ENST00000517980 C19orf71A6NCJ1 209 aa11.16□□□□□ -0.62
CTNNA1-206ENST00000517980 RAB5CP51148 216 aa11.16□□□□□ -0.62
CTNNA1-206ENST00000517980 NKX2-5P52952 324 aaPredicted RBP11.16□□□□□ -0.62
CTNNA1-206ENST00000517980 TRAV1-1A0A0B4J248 108 aa11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 RPS20P60866 119 aaKnown RBP11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 DGAT2L7PQ6IED9 249 aa11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 C9orf163Q8N9P6 203 aa11.15□□□□□ -0.62
CTNNA1-206ENST00000517980 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 PANO1I0J062 215 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 GNG4P50150 75 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 REG3AQ06141 175 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 C20orf203Q8NBC4 194 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 MED9Q9NWA0 146 aa11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.14□□□□□ -0.63
CTNNA1-206ENST00000517980 P01737 135 aa11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 NTF3P20783 257 aa11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 RPL37AP61513 92 aaKnown RBP11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 CACNG7P62955 275 aa11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 RASL11AQ6T310 242 aa11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 GFRA4Q9GZZ7 299 aa11.13□□□□□ -0.63
CTNNA1-206ENST00000517980 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 TRBV20OR9-2A0A075B6H5 130 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 H7C1H1 209 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 IFNA1P01562 189 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 SDIM1Q6ZPB5 146 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 TMEM243Q9BU79 118 aa11.12□□□□□ -0.63
CTNNA1-206ENST00000517980 F2Z2F3 143 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 SULT1A2P50226 295 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 HNRNPA3P51991 378 aaKnown RBP11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 MEF2BQ02080 365 aaPredicted RBP11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 NUDT10Q8NFP7 164 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 NUDT11Q96G61 164 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 NIT2Q9NQR4 276 aa11.11□□□□□ -0.63
CTNNA1-206ENST00000517980 XKRY2A2RUG3 117 aa11.1□□□□□ -0.63
CTNNA1-206ENST00000517980 hDV102S1A0JD36 115 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 PDE6DO43924 150 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 OXTP01178 125 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 SLPIP03973 132 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 TRGC1P0CF51 173 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 EIF5AL1Q6IS14 154 aaKnown RBP11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 DPH3P1Q9H4G8 78 aa11.09□□□□□ -0.63
CTNNA1-206ENST00000517980 A0A1B0GUV1 79 aa11.08□□□□□ -0.64
CTNNA1-206ENST00000517980 TWIST1Q15672 202 aa11.08□□□□□ -0.64
CTNNA1-206ENST00000517980 C9orf62Q8N4C0 152 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms