RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 RPL19P84098 196 aaKnown RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 RTL8BQ17RB0 113 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 SPANXN3Q5MJ09 141 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 DHRS4L2Q6PKH6 230 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 C4orf22Q6V702 233 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 FP248Q71RG6 208 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 NEK7Q8TDX7 302 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 ANP32BQ92688 251 aaKnown RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 BORCS7Q96B45 105 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 BTF3L4Q96K17 158 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 HIGD2AQ9BW72 106 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 WDR61Q9GZS3 305 aaKnown RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 NMNAT1Q9HAN9 279 aaPredicted RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 ARMC1Q9NVT9 282 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 MRPL16Q9NX20 251 aaKnown RBP1.58□□□□□ -2.16
CPNE3-204ENST00000517862 AK3Q9UIJ7 227 aa1.58□□□□□ -2.16
CPNE3-204ENST00000517862 NDUFA4O00483 81 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 NAPSAO96009 420 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 IFNA7P01567 189 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 SRP19P09132 144 aaKnown RBP1.57□□□□□ -2.16
CPNE3-204ENST00000517862 RPL27AP46776 148 aaKnown RBP1.57□□□□□ -2.16
CPNE3-204ENST00000517862 CAV1Q03135 178 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 KRR1Q13601 381 aaKnown RBP1.57□□□□□ -2.16
CPNE3-204ENST00000517862 IAH1Q2TAA2 248 aaPredicted RBP1.57□□□□□ -2.16
CPNE3-204ENST00000517862 MCFD2Q8NI22 146 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 VSTM2AQ8TAG5 236 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 ACOT12Q8WYK0 555 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 PRRT1Q99946 306 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 SLC35B3Q9H1N7 401 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 VCX3BQ9H321 246 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 EFCAB1Q9HAE3 211 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 TP73-AS1Q9UF72 201 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 CYSLTR1Q9Y271 337 aa1.57□□□□□ -2.16
CPNE3-204ENST00000517862 UTP11Q9Y3A2 253 aaKnown RBP1.57□□□□□ -2.16
CPNE3-204ENST00000517862 IGHV3-64A0A075B6Q5 118 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 A0A1W2PNM2 257 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 C11orf86A6NJI1 115 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 A8MT66 165 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 PGRMC1O00264 195 aaKnown RBP1.56□□□□□ -2.16
CPNE3-204ENST00000517862 LEPROTO15243 131 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 OR2H2O95918 312 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 MT-ND6P03923 174 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 CSN2P05814 226 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 CTSGP08311 255 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 SMIM17P0DL12 118 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 GZMBP10144 247 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 DEFA4P12838 97 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 HLA-DRB4P13762 266 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 SRIP30626 198 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 CSN1S1P47710 185 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 RBM11P57052 281 aaKnown RBP1.56□□□□□ -2.16
CPNE3-204ENST00000517862 Q6ZS49 121 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 CLECL1Q8IZS7 167 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 TTC9CQ8N5M4 171 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 C1orf54Q8WWF1 131 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 MND1Q9BWT6 205 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 COMMD5Q9GZQ3 224 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 BCL2L10Q9HD36 194 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 TXNL4BQ9NX01 149 aaKnown RBP1.56□□□□□ -2.16
CPNE3-204ENST00000517862 RBM7Q9Y580 266 aaKnown RBP1.56□□□□□ -2.16
CPNE3-204ENST00000517862 HLA-DRB4X5D2U9 266 aa1.56□□□□□ -2.16
CPNE3-204ENST00000517862 TRAV14DV4A0A0A6YYC5 116 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 A0A0J9YX75 114 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 H3BT86 120 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 IGLV6-57P01721 117 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 BPGMP07738 259 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 OR4E1P0C645 316 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 HTN1P15515 57 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 XCL1P47992 114 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 CRYBA4P53673 196 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 TAS2R20P59543 309 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 POLR2GP62487 172 aaKnown RBP eCLIP1.55□□□□□ -2.16
CPNE3-204ENST00000517862 ZNF846Q147U1 533 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 C1orf137Q5JT78 98 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 KRTAP8-1Q8IUC2 63 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 SMIM20Q8N5G0 67 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 GDPD1Q8N9F7 314 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 LINC00304Q8N9R0 145 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 SMCR5Q8TEV8 140 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 MRPS24Q96EL2 167 aaKnown RBP1.55□□□□□ -2.16
CPNE3-204ENST00000517862 IMMP2LQ96T52 175 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 NIPSNAP1Q9BPW8 284 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 MIEN1Q9BRT3 115 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 TMEM222Q9H0R3 208 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 IL36BQ9NZH7 164 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 CALML5Q9NZT1 146 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 SS18L2Q9UHA2 77 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 RSL24D1Q9UHA3 163 aaKnown RBP1.55□□□□□ -2.16
CPNE3-204ENST00000517862 NAT8Q9UHE5 227 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 FUT9Q9Y231 359 aa1.55□□□□□ -2.16
CPNE3-204ENST00000517862 TRAV9-1A0A075B6T8 112 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 IGKV2-24A0A0C4DH68 120 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 GRIFINA4D1Z8 144 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 SDHAF1A6NFY7 115 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 H3BPC8 53 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 HMGB3O15347 200 aaKnown RBP1.54□□□□□ -2.16
CPNE3-204ENST00000517862 BANF1O75531 89 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 CDS2O95674 445 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 ZNF682O95780 498 aa1.54□□□□□ -2.16
CPNE3-204ENST00000517862 IGKV1-17P01599 117 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms