RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 UBE2D4Q9Y2X8 147 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 R4GMQ9 66 aa-4.02□□□□□ -3.05
SNORA40.16-201ENST00000517238 DCHS1Q96JQ0 3298 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 YTHDC2Q9H6S0 1430 aaKnown RBP-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 IGHV1-24A0A0C4DH33 117 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 HCG22E2RYF7 251 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 CST2P09228 141 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 TPT1P13693 172 aaKnown RBP-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 NFYBP25208 207 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 MYL6P60660 151 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 POLR2FP61218 127 aaKnown RBP-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 MSMO1Q15800 293 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 ALKAL1Q6UXT8 129 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 OR51D1Q8NGF3 324 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 STOML2Q9UJZ1 356 aa-4.03□□□□□ -3.05
SNORA40.16-201ENST00000517238 SHANK2Q9UPX8 1470 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 BAG2O95816 211 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 TTRP02766 147 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 CRYGCP07315 174 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 C1orf195Q5TG92 126 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 DNM1P34Q6PK57 102 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 ARL6IP6Q8N6S5 226 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 MCEEQ96PE7 176 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 PPP1R2P1Q96PQ5 205 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 RTL9Q8NET4 1388 aa-4.04□□□□□ -3.06
SNORA40.16-201ENST00000517238 NUP210LQ5VU65 1888 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 TINCRA0A1B0GVN0 87 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 SUPT3HB4E1H0 165 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 SYT1P21579 422 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 OMPP47874 163 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 MORN4Q8NDC4 146 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 SERPINB11Q96P15 392 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 ENPP5Q9UJA9 477 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 HPCAL4Q9UM19 191 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 PKIGQ9Y2B9 76 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 ADGRL3Q9HAR2 1447 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 PTPRMP28827 1452 aa-4.05□□□□□ -3.06
SNORA40.16-201ENST00000517238 MMP24-AS1A0A0U1RRL7 71 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 TMEM238C9JI98 176 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 C8GP07360 202 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 BCAP31P51572 246 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 PSME3P61289 254 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 HBBP68871 147 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 Q6ZUT4 128 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 FDCSPQ8NFU4 85 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 WDFY4Q6ZS81 3184 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 PIK3C2AO00443 1686 aa-4.06□□□□□ -3.06
SNORA40.16-201ENST00000517238 PSME4Q14997 1843 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 A0A1B0GW15 77 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 RPL35P42766 123 aaKnown RBP-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 NAA20P61599 178 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 HMGN5P82970 282 aaKnown RBP-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 MED21Q13503 144 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 Q6AWC8 147 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 SLC25A26Q70HW3 274 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 TAS2R42Q7RTR8 314 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 METTL1Q9UBP6 276 aaKnown RBP-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 RAD50Q92878 1312 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 NCOA3Q9Y6Q9 1424 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 MYH1P12882 1939 aa-4.07□□□□□ -3.06
SNORA40.16-201ENST00000517238 TRBV7-3A0A075B6L6 115 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 TRAV2A0A0B4J234 112 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 PPP1R17O96001 155 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 IFNA16P05015 189 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 CKS2P33552 79 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 INSL3P51460 131 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 GLTPQ9NZD2 209 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 UFC1Q9Y3C8 167 aa-4.08□□□□□ -3.06
SNORA40.16-201ENST00000517238 MYH6P13533 1939 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 MYH8P13535 1937 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 LRRC37A3O60309 1634 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 RAB19A4D1S5 217 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 MAP1LC3B2A6NCE7 125 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 TMEM114B3SHH9 223 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 PGRMC1O00264 195 aaKnown RBP-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 OCMP0CE72 109 aaPredicted RBP-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 SLC25A4P12235 298 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 RPL12P30050 165 aaKnown RBP-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 UBE2D1P51668 147 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 VAMP3Q15836 100 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 CLVS2Q5SYC1 327 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 SFXN4Q6P4A7 337 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 TTC9CQ8N5M4 171 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 TAS2R8Q9NYW2 309 aa-4.09□□□□□ -3.06
SNORA40.16-201ENST00000517238 VPS13CQ709C8 3753 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 NCAPD3P42695 1498 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 DISP2A7MBM2 1401 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 CCDC171Q6TFL3 1326 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 IFNA1P01562 189 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 APOA1P02647 267 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 MYL12AP19105 171 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 MAXP61244 160 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 STK38Q15208 465 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 C10orf113Q5VZT2 155 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 TPT1P8Q9HAU6 139 aa-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 IMP3Q9NV31 184 aaKnown RBP-4.1□□□□□ -3.07
SNORA40.16-201ENST00000517238 PRDM2Q13029 1718 aa-4.11□□□□□ -3.07
SNORA40.16-201ENST00000517238 FAM236DA0A1B0GTK5 79 aa-4.11□□□□□ -3.07
SNORA40.16-201ENST00000517238 WRBO00258 174 aa-4.11□□□□□ -3.07
SNORA40.16-201ENST00000517238 APOC3P02656 99 aa-4.11□□□□□ -3.07
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms