RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 BLCAPP62952 87 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 SPCS2Q15005 226 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 OTOSQ8NHW6 89 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 LAMTOR3Q9UHA4 124 aa-3.35□□□□□ -2.95
SCARNA23-201ENST00000516060 UHRF1BP1Q6BDS2 1440 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 HMGB3O15347 200 aaKnown RBP-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 PITX3O75364 302 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 COX8AP10176 69 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 CKS2P33552 79 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 MRC1P22897 1456 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 ADGBQ8N7X0 1667 aa-3.36□□□□□ -2.95
SCARNA23-201ENST00000516060 TLN2Q9Y4G6 2542 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 PAPPA2Q9BXP8 1791 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 TRAV12-3A0A0B4J271 114 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 FAM92AA1XBS5 289 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 C9orf92A6NGG3 77 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 IQCF5A8MTL0 148 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 DEXIO95424 95 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 IFNA16P05015 189 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 SMIM6P0DI80 62 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 OR51A4Q8NGJ6 313 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 SIKE1Q9BRV8 207 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 NAA60Q9H7X0 242 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 PYCARDQ9ULZ3 195 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 ATMQ13315 3056 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 TRAPPC8Q9Y2L5 1435 aa-3.37□□□□□ -2.95
SCARNA23-201ENST00000516060 HMGXB3Q12766 1538 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 FMN2Q9NZ56 1722 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 TRAV16A0A0A6YYK6 109 aaPredicted RBP-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 CLPSL1A2RUU4 121 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 CPSF4LA6NMK7 179 aaKnown RBP-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 STX19Q8N4C7 294 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 ERG28Q9UKR5 140 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 ANKRD50Q9ULJ7 1429 aa-3.38□□□□□ -2.95
SCARNA23-201ENST00000516060 CCDC171Q6TFL3 1326 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 TRAV2A0A0B4J234 112 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 MAP1LC3B2A6NCE7 125 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 K7EP34 96 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 MT1GP13640 62 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 NCALDP61601 193 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 Q6JHZ5 121 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 SLC25A26Q70HW3 274 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 OTORQ9NRC9 128 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 TAS2R8Q9NYW2 309 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 GUCA1BQ9UMX6 200 aa-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 TLN1Q9Y490 2541 aaKnown RBP-3.39□□□□□ -2.95
SCARNA23-201ENST00000516060 FABP2P12104 132 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 RPL19P84098 196 aaKnown RBP-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 RTL8BQ17RB0 113 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 SCGB2B2Q4G0G5 96 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 RTL8AQ9BWD3 113 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 LRTM1Q9HBL6 345 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 SBF2Q86WG5 1849 aa-3.4□□□□□ -2.95
SCARNA23-201ENST00000516060 CCDC144AA2RUR9 1427 aa-3.41□□□□□ -2.96
SCARNA23-201ENST00000516060 ZNF236Q9UL36 1845 aa-3.41□□□□□ -2.96
SCARNA23-201ENST00000516060 CCDC122Q5T0U0 273 aa-3.41□□□□□ -2.96
SCARNA23-201ENST00000516060 USE1Q9NZ43 259 aa-3.41□□□□□ -2.96
SCARNA23-201ENST00000516060 TULP4Q9NRJ4 1543 aa-3.41□□□□□ -2.96
SCARNA23-201ENST00000516060 RIIAD1A6NNX1 92 aa-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 H3BQV1 296 aa-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 MRPS15P82914 257 aaKnown RBP-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 TMEM97Q5BJF2 176 aa-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 SMIM4Q8WVI0 70 aa-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 AMELXQ99217 191 aa-3.42□□□□□ -2.96
SCARNA23-201ENST00000516060 TRBV27A0A0K0K1C4 114 aa-3.43□□□□□ -2.96
SCARNA23-201ENST00000516060 NDUFC2O95298 119 aa-3.43□□□□□ -2.96
SCARNA23-201ENST00000516060 PAIP2Q9BPZ3 127 aaKnown RBP-3.43□□□□□ -2.96
SCARNA23-201ENST00000516060 ADGRG4Q8IZF6 3080 aa-3.43□□□□□ -2.96
SCARNA23-201ENST00000516060 PGRMC1O00264 195 aaKnown RBP-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 C9orf116Q5BN46 136 aaPredicted RBP-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 FAM9CQ8IZT9 166 aa-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 CARD19Q96LW7 228 aa-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 POLA1P09884 1462 aaPredicted RBP-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 MAGI1Q96QZ7 1491 aaPredicted RBP-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 LRRC37A3O60309 1634 aa-3.44□□□□□ -2.96
SCARNA23-201ENST00000516060 MUC22E2RYF6 1773 aaPredicted RBP-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 PDE4DIPQ5VU43 2346 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 MAP3K5Q99683 1374 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 AIPO00170 330 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 YKT6O15498 198 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 APOA2P02652 100 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 CYBAP13498 195 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 CCL18P55774 89 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 DYNLRB2Q8TF09 96 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 BORCS8Q96FH0 119 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 KNDC1Q76NI1 1749 aa-3.45□□□□□ -2.96
SCARNA23-201ENST00000516060 PNMA8CA0A1B0GUJ8 204 aa-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 S100A9P06702 114 aaKnown RBP-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 HSPE1P61604 102 aaKnown RBP-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 PLGLB1Q02325 96 aa-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 NUP210Q8TEM1 1887 aaPredicted RBP-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 TECPR2O15040 1411 aa-3.46□□□□□ -2.96
SCARNA23-201ENST00000516060 PRDM2Q13029 1718 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 TRBV7-4A0A0J9YYF1 115 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 TMEM114B3SHH9 223 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 HBDP02042 147 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 UBE2D1P51668 147 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 PCBD1P61457 104 aa-3.47□□□□□ -2.96
SCARNA23-201ENST00000516060 LSM3P62310 102 aaKnown RBP-3.47□□□□□ -2.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms