RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 TMEM262E9PQX1 116 aa11.52□□□□□ -0.57
DDX41-217ENST00000515562 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.57
DDX41-217ENST00000515562 TMEM97Q5BJF2 176 aa11.52□□□□□ -0.57
DDX41-217ENST00000515562 DAZAP1Q96EP5 407 aaKnown RBP11.52□□□□□ -0.57
DDX41-217ENST00000515562 DNAJC30Q96LL9 226 aa11.52□□□□□ -0.57
DDX41-217ENST00000515562 FAM30AQ9NZY2 134 aa11.52□□□□□ -0.57
DDX41-217ENST00000515562 PDE6DO43924 150 aa11.51□□□□□ -0.57
DDX41-217ENST00000515562 IFNA1P01562 189 aa11.51□□□□□ -0.57
DDX41-217ENST00000515562 CRPP02741 224 aa11.51□□□□□ -0.57
DDX41-217ENST00000515562 SULT1A2P50226 295 aa11.51□□□□□ -0.57
DDX41-217ENST00000515562 MEF2BQ02080 365 aaPredicted RBP11.51□□□□□ -0.57
DDX41-217ENST00000515562 KIF25-AS1Q9Y6Z4 181 aa11.51□□□□□ -0.57
DDX41-217ENST00000515562 GNG4P50150 75 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 SSTP61278 116 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 MPV17L2Q567V2 206 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 TCTE3Q8IZS6 198 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 FER1L6-AS1Q8NA97 138 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 CHCHD5Q9BSY4 110 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 TPPP3Q9BW30 176 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 C1orf43Q9BWL3 253 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 VAX2Q9UIW0 290 aa11.5□□□□□ -0.57
DDX41-217ENST00000515562 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 IGLV2-8P01709 118 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 IGLC6P0CF74 106 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 C15orf54Q8N8G6 183 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 OR2D3Q8NGH3 330 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
DDX41-217ENST00000515562 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
DDX41-217ENST00000515562 H7C1H1 209 aa11.48□□□□□ -0.57
DDX41-217ENST00000515562 ANGP03950 147 aaKnown RBP11.48□□□□□ -0.57
DDX41-217ENST00000515562 CACNG7P62955 275 aa11.48□□□□□ -0.57
DDX41-217ENST00000515562 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
DDX41-217ENST00000515562 BIN3Q9NQY0 253 aa11.48□□□□□ -0.57
DDX41-217ENST00000515562 P01737 135 aa11.47□□□□□ -0.57
DDX41-217ENST00000515562 GZMBP10144 247 aa11.47□□□□□ -0.57
DDX41-217ENST00000515562 BCL2P10415 239 aa11.47□□□□□ -0.57
DDX41-217ENST00000515562 ENHOQ6UWT2 76 aa11.47□□□□□ -0.57
DDX41-217ENST00000515562 SLC51BQ86UW2 128 aa11.47□□□□□ -0.57
DDX41-217ENST00000515562 TRBV25-1A0A075B6N4 114 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 RAB19A4D1S5 217 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 F2Z2F3 143 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 MGPP08493 103 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 TAGLN2P37802 199 aaKnown RBP11.46□□□□□ -0.57
DDX41-217ENST00000515562 MIAQ16674 131 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 MED9Q9NWA0 146 aa11.46□□□□□ -0.57
DDX41-217ENST00000515562 DMBT1Q9UGM3 2413 aaPredicted RBP11.45□□□□□ -0.58
DDX41-217ENST00000515562 TRBV20OR9-2A0A075B6H5 130 aa11.45□□□□□ -0.58
DDX41-217ENST00000515562 M0QY20 66 aa11.45□□□□□ -0.58
DDX41-217ENST00000515562 PLA2G1BP04054 148 aaKnown RBP11.45□□□□□ -0.58
DDX41-217ENST00000515562 NTM-AS1Q6ZSK4 140 aa11.45□□□□□ -0.58
DDX41-217ENST00000515562 SRRM2Q9UQ35 2752 aaKnown RBP11.45□□□□□ -0.58
DDX41-217ENST00000515562 TRGC1P0CF51 173 aa11.44□□□□□ -0.58
DDX41-217ENST00000515562 IQCJQ1A5X6 159 aa11.44□□□□□ -0.58
DDX41-217ENST00000515562 LINC01620Q4KN68 170 aa11.44□□□□□ -0.58
DDX41-217ENST00000515562 IGHV1-24A0A0C4DH33 117 aa11.43□□□□□ -0.58
DDX41-217ENST00000515562 SUMO4Q6EEV6 95 aa11.43□□□□□ -0.58
DDX41-217ENST00000515562 LINC00528Q8N1L1 170 aa11.43□□□□□ -0.58
DDX41-217ENST00000515562 PRR34Q9NV39 138 aa11.43□□□□□ -0.58
DDX41-217ENST00000515562 MYCBP2O75592 4640 aa11.43□□□□□ -0.58
DDX41-217ENST00000515562 HERC1Q15751 4861 aa11.42□□□□□ -0.58
DDX41-217ENST00000515562 HLA-DQA1P01909 254 aa11.42□□□□□ -0.58
DDX41-217ENST00000515562 RBX1P62877 108 aa11.42□□□□□ -0.58
DDX41-217ENST00000515562 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
DDX41-217ENST00000515562 CTRLP40313 264 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 GAGE6Q13070 117 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 RASL11AQ6T310 242 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 LYZL1Q6UWQ5 148 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 DPH3P1Q9H4G8 78 aa11.41□□□□□ -0.58
DDX41-217ENST00000515562 FLG2Q5D862 2391 aaPredicted RBP11.4□□□□□ -0.58
DDX41-217ENST00000515562 USP17L23D6RBM5 183 aa11.4□□□□□ -0.58
DDX41-217ENST00000515562 WDR73Q6P4I2 378 aa11.4□□□□□ -0.58
DDX41-217ENST00000515562 LINC00269Q8N2A0 174 aa11.4□□□□□ -0.58
DDX41-217ENST00000515562 C9orf62Q8N4C0 152 aa11.4□□□□□ -0.58
DDX41-217ENST00000515562 NTF3P20783 257 aa11.39□□□□□ -0.59
DDX41-217ENST00000515562 NKX2-5P52952 324 aaPredicted RBP11.39□□□□□ -0.59
DDX41-217ENST00000515562 CLPSL2Q6UWE3 100 aa11.39□□□□□ -0.59
DDX41-217ENST00000515562 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
DDX41-217ENST00000515562 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
DDX41-217ENST00000515562 CNFNQ9BYD5 112 aa11.39□□□□□ -0.59
DDX41-217ENST00000515562 PGLYRP4Q96LB8 373 aa11.38□□□□□ -0.59
DDX41-217ENST00000515562 TMEM243Q9BU79 118 aa11.38□□□□□ -0.59
DDX41-217ENST00000515562 RPP21Q9H633 154 aaKnown RBP11.38□□□□□ -0.59
DDX41-217ENST00000515562 NIT2Q9NQR4 276 aa11.38□□□□□ -0.59
DDX41-217ENST00000515562 AKAP14Q86UN6 197 aa11.37□□□□□ -0.59
DDX41-217ENST00000515562 REG3AQ06141 175 aa11.36□□□□□ -0.59
DDX41-217ENST00000515562 TWIST1Q15672 202 aa11.36□□□□□ -0.59
DDX41-217ENST00000515562 DGAT2L7PQ6IED9 249 aa11.36□□□□□ -0.59
DDX41-217ENST00000515562 Q6ZNX1 250 aa11.36□□□□□ -0.59
DDX41-217ENST00000515562 RNASE7Q9H1E1 156 aaKnown RBP11.36□□□□□ -0.59
DDX41-217ENST00000515562 A0A1B0GUV1 79 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 TMEM250H0YL14 139 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 K7EN84 100 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 KRTAP26-1Q6PEX3 210 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 CIRBP-AS1Q8TBR5 109 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
DDX41-217ENST00000515562 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
DDX41-217ENST00000515562 UBE2L6O14933 153 aa11.34□□□□□ -0.59
DDX41-217ENST00000515562 PRSS1P07477 247 aa11.34□□□□□ -0.59
DDX41-217ENST00000515562 BLOC1S1P78537 153 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms