RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 BORCS7-ASMTA0A0B4J1R7 106 aa14.56□□□□□ -0.08
SMAD1-214ENST00000514831 ZNF471Q9BX82 626 aaPredicted RBP14.56□□□□□ -0.08
SMAD1-214ENST00000514831 TRBV25-1A0A075B6N4 114 aa14.54□□□□□ -0.08
SMAD1-214ENST00000514831 FHITP49789 147 aa14.54□□□□□ -0.08
SMAD1-214ENST00000514831 GAGE6Q13070 117 aa14.54□□□□□ -0.08
SMAD1-214ENST00000514831 AKR1C8PQ5T2L2 129 aa14.54□□□□□ -0.08
SMAD1-214ENST00000514831 MAP1LC3B2A6NCE7 125 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 SNAI2O43623 268 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 AKR1C3P42330 323 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 Q5BKY6 102 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 INO80EQ8NBZ0 244 aaPredicted RBP14.53□□□□□ -0.08
SMAD1-214ENST00000514831 RNF185Q96GF1 192 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 DERL1Q9BUN8 251 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 MAP1LC3BQ9GZQ8 125 aa14.53□□□□□ -0.08
SMAD1-214ENST00000514831 REG3AQ06141 175 aa14.52□□□□□ -0.09
SMAD1-214ENST00000514831 SSBP4Q9BWG4 385 aaPredicted RBP14.52□□□□□ -0.09
SMAD1-214ENST00000514831 IGHV3-64A0A075B6Q5 118 aa14.51□□□□□ -0.09
SMAD1-214ENST00000514831 hDV102S1A0JD36 115 aa14.51□□□□□ -0.09
SMAD1-214ENST00000514831 A6NHS1 94 aa14.51□□□□□ -0.09
SMAD1-214ENST00000514831 F5H697 171 aa14.51□□□□□ -0.09
SMAD1-214ENST00000514831 IQCJQ1A5X6 159 aa14.51□□□□□ -0.09
SMAD1-214ENST00000514831 IGLV10-54A0A075B6I4 117 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 A0A087WYN8 130 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 OR5AL1P0C617 328 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 SPANXN1Q5VSR9 72 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 CST9LP1Q5W188 147 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 STOML3Q8TAV4 291 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 SPACA4Q8TDM5 124 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 MED28Q9H204 178 aa14.5□□□□□ -0.09
SMAD1-214ENST00000514831 TNXBP22105 4242 aa14.49□□□□□ -0.09
SMAD1-214ENST00000514831 KIF25-AS1Q9Y6Z4 181 aa14.49□□□□□ -0.09
SMAD1-214ENST00000514831 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.48□□□□□ -0.09
SMAD1-214ENST00000514831 TRAV8-4A0A0B4J246 113 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 IGHV1-24A0A0C4DH33 117 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 MUC21A0A0G2JKD1 596 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 MUC21A0A140T8X8 626 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 P01737 135 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 GIPP09681 153 aaPredicted RBP14.48□□□□□ -0.09
SMAD1-214ENST00000514831 CHTF8P0CG12 524 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 AP5S1Q9NUS5 200 aa14.48□□□□□ -0.09
SMAD1-214ENST00000514831 FXYD6-FXYD2A0A087WZ82 144 aa14.47□□□□□ -0.09
SMAD1-214ENST00000514831 C20orf203Q8NBC4 194 aa14.47□□□□□ -0.09
SMAD1-214ENST00000514831 AP1S3Q96PC3 154 aa14.47□□□□□ -0.09
SMAD1-214ENST00000514831 MLST8Q9BVC4 326 aa14.47□□□□□ -0.09
SMAD1-214ENST00000514831 SLPIP03973 132 aa14.46□□□□□ -0.09
SMAD1-214ENST00000514831 S100A9P06702 114 aaKnown RBP14.46□□□□□ -0.09
SMAD1-214ENST00000514831 SMIM17P0DL12 118 aa14.46□□□□□ -0.09
SMAD1-214ENST00000514831 PLAC8Q9NZF1 115 aa14.46□□□□□ -0.09
SMAD1-214ENST00000514831 LRP2P98164 4655 aa14.45□□□□□ -0.1
SMAD1-214ENST00000514831 DPH3Q96FX2 82 aa14.45□□□□□ -0.1
SMAD1-214ENST00000514831 PHOX2AO14813 284 aa14.44□□□□□ -0.1
SMAD1-214ENST00000514831 PAGE4O60829 102 aa14.44□□□□□ -0.1
SMAD1-214ENST00000514831 GZMBP10144 247 aa14.44□□□□□ -0.1
SMAD1-214ENST00000514831 A0A1B0GUV1 79 aa14.43□□□□□ -0.1
SMAD1-214ENST00000514831 C7orf33Q8WU49 177 aa14.43□□□□□ -0.1
SMAD1-214ENST00000514831 IGLV4-60A0A075B6I1 120 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 SCO2A0A1W2PP80 73 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 M0QY20 66 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 SSTP61278 116 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 BAGE2Q86Y30 109 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 GFRA4Q9GZZ7 299 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 DPH3P1Q9H4G8 78 aa14.42□□□□□ -0.1
SMAD1-214ENST00000514831 H7C1H1 209 aa14.41□□□□□ -0.1
SMAD1-214ENST00000514831 LINC01600Q96MT4 127 aa14.41□□□□□ -0.1
SMAD1-214ENST00000514831 TMEM243Q9BU79 118 aa14.41□□□□□ -0.1
SMAD1-214ENST00000514831 MGPP08493 103 aa14.39□□□□□ -0.11
SMAD1-214ENST00000514831 CYTL1Q9NRR1 136 aa14.39□□□□□ -0.11
SMAD1-214ENST00000514831 RAB5CP51148 216 aa14.38□□□□□ -0.11
SMAD1-214ENST00000514831 SUMO4Q6EEV6 95 aa14.38□□□□□ -0.11
SMAD1-214ENST00000514831 WDR73Q6P4I2 378 aa14.38□□□□□ -0.11
SMAD1-214ENST00000514831 C15orf56Q8N910 161 aa14.38□□□□□ -0.11
SMAD1-214ENST00000514831 PFDN1O60925 122 aa14.37□□□□□ -0.11
SMAD1-214ENST00000514831 PRR3P79522 188 aaKnown RBP14.37□□□□□ -0.11
SMAD1-214ENST00000514831 PGLYRP4Q96LB8 373 aa14.37□□□□□ -0.11
SMAD1-214ENST00000514831 G3V3Q6 166 aa14.36□□□□□ -0.11
SMAD1-214ENST00000514831 NKX2-5P52952 324 aaPredicted RBP14.36□□□□□ -0.11
SMAD1-214ENST00000514831 RNF213Q63HN8 5207 aa14.36□□□□□ -0.11
SMAD1-214ENST00000514831 IGLC6P0CF74 106 aa14.35□□□□□ -0.11
SMAD1-214ENST00000514831 COX6A2Q02221 97 aa14.35□□□□□ -0.11
SMAD1-214ENST00000514831 NDUFS6O75380 124 aaKnown RBP14.34□□□□□ -0.11
SMAD1-214ENST00000514831 SULT1A2P50226 295 aa14.34□□□□□ -0.11
SMAD1-214ENST00000514831 RASL11AQ6T310 242 aa14.34□□□□□ -0.11
SMAD1-214ENST00000514831 SFT2D1Q8WV19 159 aa14.34□□□□□ -0.11
SMAD1-214ENST00000514831 MBD3L1Q8WWY6 194 aa14.34□□□□□ -0.11
SMAD1-214ENST00000514831 UBE2L6O14933 153 aa14.33□□□□□ -0.12
SMAD1-214ENST00000514831 ARPC5O15511 151 aa14.33□□□□□ -0.12
SMAD1-214ENST00000514831 RPS10P46783 165 aaKnown RBP14.33□□□□□ -0.12
SMAD1-214ENST00000514831 CFAP161Q6P656 301 aa14.33□□□□□ -0.12
SMAD1-214ENST00000514831 FER1L6-AS1Q8NA97 138 aa14.33□□□□□ -0.12
SMAD1-214ENST00000514831 TPPP3Q9BW30 176 aa14.33□□□□□ -0.12
SMAD1-214ENST00000514831 A0A1B0GV50 99 aa14.32□□□□□ -0.12
SMAD1-214ENST00000514831 ODF1Q14990 250 aa14.32□□□□□ -0.12
SMAD1-214ENST00000514831 MAJINQ3KP22 176 aa14.32□□□□□ -0.12
SMAD1-214ENST00000514831 TMUB2Q71RG4 321 aa14.32□□□□□ -0.12
SMAD1-214ENST00000514831 GTSF1Q8WW33 167 aa14.32□□□□□ -0.12
SMAD1-214ENST00000514831 IGKV2-24A0A0C4DH68 120 aa14.31□□□□□ -0.12
SMAD1-214ENST00000514831 A0A0J9YXV3 536 aa14.31□□□□□ -0.12
SMAD1-214ENST00000514831 GAGE12HA6NDE8 117 aa14.31□□□□□ -0.12
SMAD1-214ENST00000514831 RPL35P42766 123 aaKnown RBP14.31□□□□□ -0.12
SMAD1-214ENST00000514831 CACNG7P62955 275 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms