RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 IGHV7-81A0A0B4J1V7 117 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 TRAV12-3A0A0B4J271 114 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 NTN3O00634 580 aaPredicted RBP2.82□□□□□ -1.96
AFP-205ENST00000513720 LY6HO94772 140 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 IGKV1-39P01597 117 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 IGKV1D-39P04432 117 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 COX6B1P14854 86 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 NREPQ16612 68 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 REG3GQ6UW15 175 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 Q6ZS52 159 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 DEFB106AQ8N104 65 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 Q8N814 137 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 LINC00846Q9NV44 126 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 TMEM14CQ9P0S9 112 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 DEC1Q9P2X7 70 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 COL4A6Q14031 1691 aa2.82□□□□□ -1.96
AFP-205ENST00000513720 DSCAMO60469 2012 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 FER1L5A0AVI2 2057 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 PLXNB1O43157 2135 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 TET1Q8NFU7 2136 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 TRBV6-6A0A0A6YYG2 114 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-74A0A0B4J1X5 117 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-35A0A0C4DH35 117 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 IGKV1-6A0A0C4DH72 117 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 F8W735 103 aaPredicted RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 K7EQG2 157 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 SAA2P0DJI9 122 aaPredicted RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 HMGA1P17096 107 aaKnown RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 C1orf134Q5TEV5 83 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 C9orf106Q8NAJ2 232 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 LINC00476Q8WZB0 136 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 FGF23Q9GZV9 251 aaPredicted RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 LINC00574Q9H8X3 128 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 MSRB1Q9NZV6 116 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 DPM3Q9P2X0 92 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 KIF25-AS1Q9Y6Z4 181 aa2.81□□□□□ -1.96
AFP-205ENST00000513720 TNRC6CQ9HCJ0 1690 aaKnown RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 GOLGA4Q13439 2230 aaKnown RBP2.81□□□□□ -1.96
AFP-205ENST00000513720 MDC1Q14676 2089 aaKnown RBP2.8□□□□□ -1.96
AFP-205ENST00000513720 A0A0J9YX75 114 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 PINLYPA6NC86 204 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 LRCOL1A6NCL2 159 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 PMS2P5A8MQ11 134 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 PATE3B3GLJ2 98 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 INAFM1C9JVW0 142 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 JMJD7-PLA2G4BH0Y9G9 81 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 IGLV1-51P01701 117 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 MSMBP08118 114 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 IGHV4-38-2P0DP08 117 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 CCL3P10147 92 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 CCL5P13501 91 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 BRWD1-AS2P59051 145 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 MIAQ16674 131 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 FAM74A4Q5TZK3 123 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 Q8IYB0 196 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 C20orf203Q8NBC4 194 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 FDCSPQ8NFU4 85 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 B9D2Q9BPU9 175 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 C7orf69Q9H7B7 122 aa2.8□□□□□ -1.96
AFP-205ENST00000513720 TET2Q6N021 2002 aaPredicted RBP2.8□□□□□ -1.96
AFP-205ENST00000513720 TRBV6-1A0A0K0K1D8 114 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 NDUFB1O75438 58 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-11P01762 117 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-13P01766 116 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 SPTBP11277 2137 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 DEFA4P12838 97 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 KLHL30-AS1Q8NEE0 82 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 LINC01560Q8TB33 94 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 PRAC1Q96KF2 57 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 C1orf147Q96MC9 270 aaPredicted RBP2.79□□□□□ -1.96
AFP-205ENST00000513720 CAMK2N2Q96S95 79 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 CDC42SE2Q9NRR3 84 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 ORMDL1Q9P0S3 153 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 ZNF580Q9UK33 172 aa2.79□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-43A0A0B4J1X8 118 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 IGKV6D-41A0A0C4DH26 115 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 IGHV3-38A0A0C4DH36 116 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 B4DSR2 109 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 LY6G6DO95868 133 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 FSHBP01225 129 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 IGLV2-11P01706 119 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 CMC4P56277 68 aaPredicted RBP2.78□□□□□ -1.96
AFP-205ENST00000513720 ELOF1P60002 83 aaKnown RBP2.78□□□□□ -1.96
AFP-205ENST00000513720 IGLV3-21P80748 117 aaPredicted RBP2.78□□□□□ -1.96
AFP-205ENST00000513720 FHL1Q13642 323 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 C17orf58Q2M2W7 97 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 ZNF833PQ6ZTB9 187 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 ZFAND2AQ8N6M9 145 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 WFDC9Q8NEX5 89 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 FLVCR1-AS1Q8TAF5 88 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 C14orf132Q9NPU4 83 aa2.78□□□□□ -1.96
AFP-205ENST00000513720 MUC22E2RYF6 1773 aaPredicted RBP2.78□□□□□ -1.96
AFP-205ENST00000513720 LTBP1Q14766 1721 aa2.77□□□□□ -1.97
AFP-205ENST00000513720 IGHV3-21A0A0B4J1V1 117 aa2.77□□□□□ -1.97
AFP-205ENST00000513720 TRAV10A0A0B4J240 114 aa2.77□□□□□ -1.97
AFP-205ENST00000513720 A0A0J9YXY3 114 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms