RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 LINC01600Q96MT4 127 aa8.54□□□□□ -1.04
SNX25-205ENST00000512853 SCGB1C2P0DMR2 95 aa8.54□□□□□ -1.04
SNX25-205ENST00000512853 PSMB8P28062 276 aa8.54□□□□□ -1.04
SNX25-205ENST00000512853 TRGV11A0A075B6L2 103 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 TRAV12-2A0A075B6T6 113 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.53□□□□□ -1.04
SNX25-205ENST00000512853 TMEM89A2RUT3 159 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 SLC25A20O43772 301 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
SNX25-205ENST00000512853 ERG28Q9UKR5 140 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 ATRXP46100 2492 aa8.53□□□□□ -1.04
SNX25-205ENST00000512853 TRAV2A0A0B4J234 112 aa8.52□□□□□ -1.04
SNX25-205ENST00000512853 A0A0J9YXV3 536 aa8.52□□□□□ -1.04
SNX25-205ENST00000512853 MUSTN1Q8IVN3 82 aa8.52□□□□□ -1.04
SNX25-205ENST00000512853 IGF2RP11717 2491 aa8.52□□□□□ -1.05
SNX25-205ENST00000512853 A0A0J9YXY3 114 aa8.52□□□□□ -1.05
SNX25-205ENST00000512853 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
SNX25-205ENST00000512853 TGFAP01135 160 aa8.52□□□□□ -1.05
SNX25-205ENST00000512853 MSMBP08118 114 aa8.52□□□□□ -1.05
SNX25-205ENST00000512853 GEMIN7Q9H840 131 aaKnown RBP8.52□□□□□ -1.05
SNX25-205ENST00000512853 C9JAW5 83 aa8.51□□□□□ -1.05
SNX25-205ENST00000512853 SPINK13Q1W4C9 94 aa8.51□□□□□ -1.05
SNX25-205ENST00000512853 TMEM95Q3KNT9 176 aa8.51□□□□□ -1.05
SNX25-205ENST00000512853 FAM104AQ969W3 186 aa8.51□□□□□ -1.05
SNX25-205ENST00000512853 IGKV3-20P01619 116 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 MRPS36P82909 103 aaKnown RBP8.5□□□□□ -1.05
SNX25-205ENST00000512853 RAX2Q96IS3 184 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 LITAFQ99732 161 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 COL6A6A6NMZ7 2263 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 ATXN8Q156A1 80 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 CCL19Q99731 98 aa8.5□□□□□ -1.05
SNX25-205ENST00000512853 IGHV3-64A0A075B6Q5 118 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 IGHV4-30-2A0A087WSY4 118 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 TRBV30A0A0K0K1B3 111 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 LINC01620Q4KN68 170 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 SPANXDQ9BXN6 97 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
SNX25-205ENST00000512853 A8MTW9 85 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 CD28P10747 220 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 CITED1Q99966 193 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 TIMM21Q9BVV7 248 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 AKAP6Q13023 2319 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 AVPP01185 164 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 LY6DQ14210 128 aa8.48□□□□□ -1.05
SNX25-205ENST00000512853 TRAV26-1A0A087WT03 109 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 IGHV1-58A0A0C4DH39 117 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 ELANEP08246 267 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 RBMY1A1P0DJD3 496 aaKnown RBP8.47□□□□□ -1.05
SNX25-205ENST00000512853 RBMY1CP0DJD4 496 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 GNLYP22749 145 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 RPL13AP40429 203 aaKnown RBP8.47□□□□□ -1.05
SNX25-205ENST00000512853 RBMY1FQ15415 496 aaKnown RBP8.47□□□□□ -1.05
SNX25-205ENST00000512853 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
SNX25-205ENST00000512853 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
SNX25-205ENST00000512853 TRBV10-2A0A0K0K1G8 114 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 H7C2G1 150 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 TRIAP1O43715 76 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 Q1RN00 199 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 PIK3CD-AS1Q5SR53 167 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 RELNP78509 3460 aa8.46□□□□□ -1.05
SNX25-205ENST00000512853 TINCRA0A1B0GVN0 87 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 B4DSR2 109 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 IGHV4-59P01825 116 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 GATA3P23771 443 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 ATP5J2P56134 94 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 MIAQ16674 131 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 NTN5Q8WTR8 489 aaPredicted RBP8.46□□□□□ -1.06
SNX25-205ENST00000512853 RNF183Q96D59 192 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 SPANXA1Q9NS26 97 aa8.46□□□□□ -1.06
SNX25-205ENST00000512853 SYNJ2BPP57105 145 aa8.45□□□□□ -1.06
SNX25-205ENST00000512853 Q5PR19 223 aa8.45□□□□□ -1.06
SNX25-205ENST00000512853 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
SNX25-205ENST00000512853 SPXQ9BT56 116 aa8.45□□□□□ -1.06
SNX25-205ENST00000512853 NDUFA12Q9UI09 145 aa8.45□□□□□ -1.06
SNX25-205ENST00000512853 TRAV8-3A0A0A6YYJ7 113 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 NACAE9PAV3 2078 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 TIMM17BO60830 172 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 DEFB112Q30KQ8 113 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 VSIG2Q96IQ7 327 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 CLUHP3Q96NS8 147 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 CHCHD7Q9BUK0 85 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 ICOSQ9Y6W8 199 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 DOPEY2Q9Y3R5 2298 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 ADARB2-AS1A8MUL3 147 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 PRORYQ9H606 182 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 UBE2D4Q9Y2X8 147 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
SNX25-205ENST00000512853 PRRC2AP48634 2157 aaKnown RBP8.43□□□□□ -1.06
SNX25-205ENST00000512853 PROK1P58294 105 aa8.43□□□□□ -1.06
SNX25-205ENST00000512853 ADAMTSL4-AS1Q5T5F5 129 aa8.43□□□□□ -1.06
SNX25-205ENST00000512853 ASH1LQ9NR48 2969 aaKnown RBP8.43□□□□□ -1.06
SNX25-205ENST00000512853 H3BMM0 161 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 H3BT86 120 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 HOXD3P31249 432 aaPredicted RBP8.42□□□□□ -1.06
SNX25-205ENST00000512853 ZNF415Q09FC8 603 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 CEMP1Q6PRD7 247 aaPredicted RBP8.42□□□□□ -1.06
SNX25-205ENST00000512853 TEX29Q8N6K0 151 aa8.42□□□□□ -1.06
SNX25-205ENST00000512853 UBE2WQ96B02 151 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms