RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 CHCHD5Q9BSY4 110 aa9.59□□□□□ -0.87
CCHCR1-229ENST00000512418 A0A0D9SG52 128 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 MUC21A0A0G2JKD1 596 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 MUC21A0A140T8X8 626 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 KANTRA0A1W2PQU2 76 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 HMSDA8MTL9 139 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 F5H697 171 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 SMIM17P0DL12 118 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 TMEM97Q5BJF2 176 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 CIRBP-AS1Q8TBR5 109 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 AP1S3Q96PC3 154 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
CCHCR1-229ENST00000512418 BCL2L11O43521 198 aa9.57□□□□□ -0.88
CCHCR1-229ENST00000512418 MIAQ16674 131 aa9.57□□□□□ -0.88
CCHCR1-229ENST00000512418 TMUB2Q71RG4 321 aa9.57□□□□□ -0.88
CCHCR1-229ENST00000512418 HLA-DQA1P01909 254 aa9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 RPL35P42766 123 aaKnown RBP9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 SSTP61278 116 aa9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 EIF5AP63241 154 aaKnown RBP9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 NTM-AS1Q6ZSK4 140 aa9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
CCHCR1-229ENST00000512418 TRBV25-1A0A075B6N4 114 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 USP17L23D6RBM5 183 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 IGLV2-8P01709 118 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 KRTAP10-4P60372 401 aaPredicted RBP9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 DERL1Q9BUN8 251 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 MANBALQ9NQG1 85 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 PRR34Q9NV39 138 aa9.55□□□□□ -0.88
CCHCR1-229ENST00000512418 LRP1Q07954 4544 aaKnown RBP9.54□□□□□ -0.88
CCHCR1-229ENST00000512418 RBX1P62877 108 aa9.53□□□□□ -0.88
CCHCR1-229ENST00000512418 IQCJQ1A5X6 159 aa9.53□□□□□ -0.88
CCHCR1-229ENST00000512418 CENPWQ5EE01 88 aa9.53□□□□□ -0.88
CCHCR1-229ENST00000512418 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
CCHCR1-229ENST00000512418 H7C1H1 209 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 RPS20P60866 119 aaKnown RBP9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 GAGE6Q13070 117 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 CLPSL2Q6UWE3 100 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 LINC00269Q8N2A0 174 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 FER1L6-AS1Q8NA97 138 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 DAZAP1Q96EP5 407 aaKnown RBP9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 TPPP3Q9BW30 176 aa9.52□□□□□ -0.89
CCHCR1-229ENST00000512418 TRAV1-1A0A0B4J248 108 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 M0QY20 66 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 PRSS1P07477 247 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 MGPP08493 103 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 GZMBP10144 247 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 CCL20P78556 96 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 OR2D3Q8NGH3 330 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
CCHCR1-229ENST00000512418 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 C19orf71A6NCJ1 209 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 TEX46H3BTG2 121 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 RAB5CP51148 216 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 CACNG7P62955 275 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 KRTAP26-1Q6PEX3 210 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 C9orf163Q8N9P6 203 aa9.5□□□□□ -0.89
CCHCR1-229ENST00000512418 XKRY2A2RUG3 117 aa9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 OXTP01178 125 aa9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 GNG4P50150 75 aa9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 REG3AQ06141 175 aa9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 SUMO4Q6EEV6 95 aa9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 EIF5AL1Q6IS14 154 aaKnown RBP9.49□□□□□ -0.89
CCHCR1-229ENST00000512418 F2Z2F3 143 aa9.48□□□□□ -0.89
CCHCR1-229ENST00000512418 P01737 135 aa9.48□□□□□ -0.89
CCHCR1-229ENST00000512418 RPL37AP61513 92 aaKnown RBP9.48□□□□□ -0.89
CCHCR1-229ENST00000512418 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
CCHCR1-229ENST00000512418 CLRN3Q8NCR9 226 aa9.48□□□□□ -0.89
CCHCR1-229ENST00000512418 TRAV8-4A0A0B4J246 113 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 PDE6DO43924 150 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 TRGC1P0CF51 173 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 SERTAD4-AS1Q5TG53 156 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 RASL11AQ6T310 242 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 C20orf203Q8NBC4 194 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
CCHCR1-229ENST00000512418 TRBV20OR9-2A0A075B6H5 130 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 A0A1B0GUV1 79 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 RAB19A4D1S5 217 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 IFNA1P01562 189 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 PGLYRP4Q96LB8 373 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 BIN3Q9NQY0 253 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 HMCN2Q8NDA2 5059 aa9.46□□□□□ -0.9
CCHCR1-229ENST00000512418 SULT1A2P50226 295 aa9.45□□□□□ -0.9
CCHCR1-229ENST00000512418 CNBPP62633 177 aaKnown RBP9.45□□□□□ -0.9
CCHCR1-229ENST00000512418 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
CCHCR1-229ENST00000512418 NIT2Q9NQR4 276 aa9.45□□□□□ -0.9
CCHCR1-229ENST00000512418 MED9Q9NWA0 146 aa9.45□□□□□ -0.9
CCHCR1-229ENST00000512418 IGLV4-60A0A075B6I1 120 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 BCL2P10415 239 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 NTF3P20783 257 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 CTRLP40313 264 aa9.44□□□□□ -0.9
CCHCR1-229ENST00000512418 SDIM1Q6ZPB5 146 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms