RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 CXCL1P09341 107 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 MT3P25713 68 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 ASIPP42127 132 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 RPS20P60866 119 aaKnown RBP4.99□□□□□ -1.61
RFC1-213ENST00000512275 ELOBQ15370 118 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 KRTAP21-3Q3LHN1 58 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 MRPL54Q6P161 138 aaKnown RBP4.99□□□□□ -1.61
RFC1-213ENST00000512275 C1orf158Q8N1D5 194 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 FER1L6-AS1Q8NA97 138 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 CSNK1G2-AS1Q8NCQ2 148 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 NUP35Q8NFH5 326 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 YPEL4Q96NS1 127 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 LINC01587Q99440 93 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 ZMAT5Q9UDW3 170 aaKnown RBP4.99□□□□□ -1.61
RFC1-213ENST00000512275 NAT8BQ9UHF3 227 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 MGAM2Q2M2H8 2515 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 MUC4Q99102 2169 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 NBEAL1Q6ZS30 2694 aa4.99□□□□□ -1.61
RFC1-213ENST00000512275 IGLC6P0CF74 106 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 S100A4P26447 101 aaKnown RBP4.98□□□□□ -1.61
RFC1-213ENST00000512275 APOC4P55056 127 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 DEFB135Q30KP9 77 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 MAJINQ3KP22 176 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 REG3GQ6UW15 175 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 LYZL1Q6UWQ5 148 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 KCNS1Q96KK3 526 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 IMMP2LQ96T52 175 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 GFRA4Q9GZZ7 299 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 GOLT1BQ9Y3E0 138 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 DNAH3Q8TD57 4116 aa4.98□□□□□ -1.61
RFC1-213ENST00000512275 COLCA2A8K830 154 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 K7EIL1 84 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 ARMS2P0C7Q2 107 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 CTRLP40313 264 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 C14orf177Q52M58 125 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 KPRPQ5T749 579 aaPredicted RBP4.97□□□□□ -1.61
RFC1-213ENST00000512275 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 TMEM256Q8N2U0 113 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 OR10AG1Q8NH19 301 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 BORCS7Q96B45 105 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 BTF3L4Q96K17 158 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 FAM210BQ96KR6 192 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 C20orf144Q9BQM9 153 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 PYGO2Q9BRQ0 406 aa4.97□□□□□ -1.61
RFC1-213ENST00000512275 TRBV24-1A0A075B6N3 115 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 TRAV9-1A0A075B6T8 112 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 KIR2DL5BA0A0G2JN68 375 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 KIR2DL5BA0A0G2JPC4 375 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 A0A1B0GUT8 65 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 FAM231BA6NCW3 169 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 KRTAP16-1A8MUX0 517 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 M0R381 172 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 RNASE3P12724 160 aaKnown RBP4.96□□□□□ -1.62
RFC1-213ENST00000512275 AZU1P20160 251 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 RAB4BP61018 213 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 TDRG1Q3Y452 100 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 KIR2DL5AQ8N109 375 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 KIR2DL5BQ8NHK3 375 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 RETNQ9HD89 108 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 NACAE9PAV3 2078 aa4.96□□□□□ -1.62
RFC1-213ENST00000512275 A0A0J9YWU9 116 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 A0A1B0GXF2 115 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 SNAI2O43623 268 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 OR5AL1P0C617 328 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 RAB5AP20339 215 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 RPS10P46783 165 aaKnown RBP4.95□□□□□ -1.62
RFC1-213ENST00000512275 FOXA3P55318 350 aaPredicted RBP4.95□□□□□ -1.62
RFC1-213ENST00000512275 HBBP68871 147 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 DNLZQ5SXM8 178 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 SPANXN1Q5VSR9 72 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 ZNF705AQ6ZN79 300 aaPredicted RBP4.95□□□□□ -1.62
RFC1-213ENST00000512275 C11orf72Q8NBR9 251 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 C9orf85Q96MD7 179 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 LINC00467Q9BRT7 94 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 PHLDA3Q9Y5J5 127 aa4.95□□□□□ -1.62
RFC1-213ENST00000512275 F2Z2F3 143 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 NTF3P20783 257 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 EMP1P54849 157 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 CACNG7P62955 275 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 RRN3P1Q2M238 152 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 DEFB121Q5J5C9 76 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 TMEM136Q6ZRR5 245 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 ATP5L2Q7Z4Y8 100 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 ZFP82Q8N141 532 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 OR11H2Q8NH07 326 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 TMEM263Q8WUH6 116 aaKnown RBP4.94□□□□□ -1.62
RFC1-213ENST00000512275 FRZBQ92765 325 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 MRPL16Q9NX20 251 aaKnown RBP4.94□□□□□ -1.62
RFC1-213ENST00000512275 NBEAL2Q6ZNJ1 2754 aa4.94□□□□□ -1.62
RFC1-213ENST00000512275 DNHD1Q96M86 4753 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 DEFB4AO15263 64 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 MRAPQ8TCY5 172 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 C16orf74Q96GX8 76 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 CNFNQ9BYD5 112 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 TRAPPC1Q9Y5R8 145 aa4.93□□□□□ -1.62
RFC1-213ENST00000512275 TRGV1A0A0A0MS02 117 aa4.92□□□□□ -1.62
RFC1-213ENST00000512275 A0A1B0GW15 77 aa4.92□□□□□ -1.62
RFC1-213ENST00000512275 PLAC8L1A1L4L8 177 aa4.92□□□□□ -1.62
RFC1-213ENST00000512275 M0R2P5 195 aa4.92□□□□□ -1.62
RFC1-213ENST00000512275 TRGC2P03986 189 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms