RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 APLNQ9ULZ1 77 aa13.62□□□□□ -0.23
SMAD1-211ENST00000512019 SRIP30626 198 aa13.61□□□□□ -0.23
SMAD1-211ENST00000512019 AMN1Q8IY45 258 aa13.61□□□□□ -0.23
SMAD1-211ENST00000512019 LOC100131303A0A0U1RQF7 123 aa13.6□□□□□ -0.23
SMAD1-211ENST00000512019 M0QY20 66 aa13.6□□□□□ -0.23
SMAD1-211ENST00000512019 FAM104BQ5XKR9 115 aa13.6□□□□□ -0.23
SMAD1-211ENST00000512019 SH2D6Q7Z4S9 175 aa13.6□□□□□ -0.23
SMAD1-211ENST00000512019 SMCO4Q9NRQ5 59 aa13.6□□□□□ -0.23
SMAD1-211ENST00000512019 A0A096LPF7 62 aa13.59□□□□□ -0.23
SMAD1-211ENST00000512019 RAB4AP20338 218 aa13.59□□□□□ -0.23
SMAD1-211ENST00000512019 RPL36AP83881 106 aaKnown RBP13.59□□□□□ -0.23
SMAD1-211ENST00000512019 RPL36ALQ969Q0 106 aaKnown RBP13.59□□□□□ -0.23
SMAD1-211ENST00000512019 MRAP2Q96G30 205 aa13.59□□□□□ -0.23
SMAD1-211ENST00000512019 GAGE12JA6NER3 117 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 ATP6V1G1O75348 118 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 P0DMU3 169 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 FAM231AP0DMU4 169 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 FAM231CP0DMU5 169 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 S100A1P23297 94 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 GAGE1Q13065 139 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 GAGE4Q13068 117 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 GAGE5Q13069 117 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 ELOBQ15370 118 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 GAGE13Q4V321 117 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 RNF185Q96GF1 192 aa13.58□□□□□ -0.24
SMAD1-211ENST00000512019 TRBV7-3A0A075B6L6 115 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 TRAV26-2A0A0B4J265 109 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 COX19Q49B96 90 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 NEGR1Q7Z3B1 354 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 NEXN-AS1Q8NBZ9 246 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 DNAJC30Q96LL9 226 aa13.57□□□□□ -0.24
SMAD1-211ENST00000512019 TRBV24-1A0A075B6N3 115 aa13.56□□□□□ -0.24
SMAD1-211ENST00000512019 CBLN2Q8IUK8 224 aa13.56□□□□□ -0.24
SMAD1-211ENST00000512019 KIAA1109Q2LD37 5005 aa13.56□□□□□ -0.24
SMAD1-211ENST00000512019 TGIF2-C20orf24A0A0A6YYL0 155 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 HLA-DQA1P01909 254 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 MRPL51Q4U2R6 128 aaKnown RBP13.55□□□□□ -0.24
SMAD1-211ENST00000512019 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.55□□□□□ -0.24
SMAD1-211ENST00000512019 ZNRF2Q8NHG8 242 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 NIT2Q9NQR4 276 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 Q9UF83 564 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 TNFRSF18Q9Y5U5 241 aa13.55□□□□□ -0.24
SMAD1-211ENST00000512019 PPP1R17O96001 155 aa13.54□□□□□ -0.24
SMAD1-211ENST00000512019 TMEM136Q6ZRR5 245 aa13.54□□□□□ -0.24
SMAD1-211ENST00000512019 GNB1LQ9BYB4 327 aa13.54□□□□□ -0.24
SMAD1-211ENST00000512019 DNAH17Q9UFH2 4485 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 PPBPP02775 128 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 MT-ND6P03923 174 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 CCL18P55774 89 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 UBE2D3P61077 147 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 UBE2D2P62837 147 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 OR10J3Q5JRS4 329 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 ATP6V0E2Q8NHE4 81 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 YPEL4Q96NS1 127 aa13.53□□□□□ -0.24
SMAD1-211ENST00000512019 NCR2O95944 276 aa13.52□□□□□ -0.25
SMAD1-211ENST00000512019 CKS2P33552 79 aa13.52□□□□□ -0.25
SMAD1-211ENST00000512019 PCLOQ9Y6V0 5065 aa13.51□□□□□ -0.25
SMAD1-211ENST00000512019 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
SMAD1-211ENST00000512019 RPL39LQ96EH5 51 aaKnown RBP13.51□□□□□ -0.25
SMAD1-211ENST00000512019 DNAH2Q9P225 4427 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 FAT2Q9NYQ8 4349 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 D6R8Y8 96 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 SMKR1H3BMG3 65 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 TIRAPP58753 221 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 DAZ4Q86SG3 579 aaKnown RBP13.5□□□□□ -0.25
SMAD1-211ENST00000512019 ORMDL3Q8N138 153 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 GTSF1LQ9H1H1 148 aa13.5□□□□□ -0.25
SMAD1-211ENST00000512019 DAZ3Q9NR90 486 aaKnown RBP13.5□□□□□ -0.25
SMAD1-211ENST00000512019 TRBV6-5A0A0K0K1A5 114 aa13.49□□□□□ -0.25
SMAD1-211ENST00000512019 APCSP02743 223 aa13.49□□□□□ -0.25
SMAD1-211ENST00000512019 RPS10P46783 165 aaKnown RBP13.49□□□□□ -0.25
SMAD1-211ENST00000512019 ESRGQ1W209 222 aa13.49□□□□□ -0.25
SMAD1-211ENST00000512019 LYPD5Q6UWN5 251 aa13.49□□□□□ -0.25
SMAD1-211ENST00000512019 ST20Q9HBF5 79 aa13.49□□□□□ -0.25
SMAD1-211ENST00000512019 GAS8-AS1O95177 125 aa13.48□□□□□ -0.25
SMAD1-211ENST00000512019 NRACQ8N912 160 aa13.48□□□□□ -0.25
SMAD1-211ENST00000512019 PHOX2AO14813 284 aa13.47□□□□□ -0.25
SMAD1-211ENST00000512019 TMEM97Q5BJF2 176 aa13.47□□□□□ -0.25
SMAD1-211ENST00000512019 PRELID3AQ96N28 172 aa13.47□□□□□ -0.25
SMAD1-211ENST00000512019 MRPL18Q9H0U6 180 aaKnown RBP13.47□□□□□ -0.25
SMAD1-211ENST00000512019 LAMTOR2Q9Y2Q5 125 aa13.47□□□□□ -0.25
SMAD1-211ENST00000512019 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
SMAD1-211ENST00000512019 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.25
SMAD1-211ENST00000512019 SDHAF1A6NFY7 115 aa13.46□□□□□ -0.25
SMAD1-211ENST00000512019 SCO1O75880 301 aa13.46□□□□□ -0.25
SMAD1-211ENST00000512019 TNFRSF6BO95407 300 aa13.46□□□□□ -0.25
SMAD1-211ENST00000512019 C20orf78Q9BR46 151 aa13.46□□□□□ -0.25
SMAD1-211ENST00000512019 MRPS16Q9Y3D3 137 aaKnown RBP13.46□□□□□ -0.25
SMAD1-211ENST00000512019 SUMO2P61956 95 aaKnown RBP13.45□□□□□ -0.26
SMAD1-211ENST00000512019 TMEM70Q9BUB7 260 aa13.45□□□□□ -0.26
SMAD1-211ENST00000512019 TRAPPC1Q9Y5R8 145 aa13.45□□□□□ -0.26
SMAD1-211ENST00000512019 NPYP01303 97 aa13.44□□□□□ -0.26
SMAD1-211ENST00000512019 FABP9Q0Z7S8 132 aa13.44□□□□□ -0.26
SMAD1-211ENST00000512019 LELP1Q5T871 98 aa13.44□□□□□ -0.26
SMAD1-211ENST00000512019 UPK3BQ9BT76 320 aa13.44□□□□□ -0.26
SMAD1-211ENST00000512019 DYNC1H1Q14204 4646 aaKnown RBP13.44□□□□□ -0.26
SMAD1-211ENST00000512019 COTL1Q14019 142 aa13.43□□□□□ -0.26
SMAD1-211ENST00000512019 TRAV8-6A0A0B4J262 113 aa13.42□□□□□ -0.26
SMAD1-211ENST00000512019 I3L3M4 83 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms