RNA–Protein interactions for RNA: ENST00000511812.5

SMN2-210, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 2 BASIC

Gene SMN2, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-210ENST00000511812 KIF25-AS1Q9Y6Z4 181 aa11.32□□□□□ -0.6
SMN2-210ENST00000511812 GATCO43716 136 aaKnown RBP11.31□□□□□ -0.6
SMN2-210ENST00000511812 NTF3P20783 257 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 ELOBQ15370 118 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 TMEM97Q5BJF2 176 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 WDR73Q6P4I2 378 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 NIT1Q86X76 327 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 FAM210AQ96ND0 272 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 HERC2O95714 4834 aa11.31□□□□□ -0.6
SMN2-210ENST00000511812 TRBV6-8A0A0A6YYG3 113 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 TMEM262E9PQX1 116 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
SMN2-210ENST00000511812 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 CTRLP40313 264 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 TWIST1Q15672 202 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 SMIM7Q9BQ49 75 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 CHCHD7Q9BUK0 85 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 DPH3P1Q9H4G8 78 aa11.3□□□□□ -0.6
SMN2-210ENST00000511812 RMI2Q96E14 147 aa11.29□□□□□ -0.6
SMN2-210ENST00000511812 DNAJC30Q96LL9 226 aa11.29□□□□□ -0.6
SMN2-210ENST00000511812 ZNF727A8MUV8 499 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 M0QY20 66 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 PKIAP61925 76 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 FAM231DQ6ZW35 169 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 SMIM15Q7Z3B0 74 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 CHCHD5Q9BSY4 110 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 KLK12Q9UKR0 248 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 COX11Q9Y6N1 276 aa11.28□□□□□ -0.6
SMN2-210ENST00000511812 A8MWL6 223 aa11.27□□□□□ -0.61
SMN2-210ENST00000511812 FUSP35637 526 aaKnown RBP eCLIP11.27□□□□□ -0.61
SMN2-210ENST00000511812 SRP19P09132 144 aaKnown RBP11.26□□□□□ -0.61
SMN2-210ENST00000511812 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
SMN2-210ENST00000511812 UBE2WQ96B02 151 aa11.26□□□□□ -0.61
SMN2-210ENST00000511812 CNFNQ9BYD5 112 aa11.26□□□□□ -0.61
SMN2-210ENST00000511812 TRBV25-1A0A075B6N4 114 aa11.25□□□□□ -0.61
SMN2-210ENST00000511812 LRCOL1A6NCL2 159 aa11.25□□□□□ -0.61
SMN2-210ENST00000511812 GTSF1Q8WW33 167 aa11.25□□□□□ -0.61
SMN2-210ENST00000511812 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
SMN2-210ENST00000511812 IGKV2D-24A0A075B6R9 120 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 CRPP02741 224 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 Q0VG73 95 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 CT83Q5H943 113 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 TEX261Q6UWH6 196 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
SMN2-210ENST00000511812 NIT2Q9NQR4 276 aa11.24□□□□□ -0.61
SMN2-210ENST00000511812 IGLV5-52A0A0A0MRZ9 124 aa11.23□□□□□ -0.61
SMN2-210ENST00000511812 LCE2DQ5TA82 110 aaPredicted RBP11.23□□□□□ -0.61
SMN2-210ENST00000511812 Q8N814 137 aa11.23□□□□□ -0.61
SMN2-210ENST00000511812 C15orf54Q8N8G6 183 aa11.23□□□□□ -0.61
SMN2-210ENST00000511812 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SMN2-210ENST00000511812 LRP1BQ9NZR2 4599 aa11.23□□□□□ -0.61
SMN2-210ENST00000511812 IGHV1-24A0A0C4DH33 117 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 ANGP03950 147 aaKnown RBP11.22□□□□□ -0.61
SMN2-210ENST00000511812 GCSHP23434 173 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 PEA15Q15121 130 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 FAM74A3Q4VXF1 159 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 MPV17L2Q567V2 206 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 NTM-AS1Q6ZSK4 140 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 MAPKAPK5-AS1Q8N8E1 139 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
SMN2-210ENST00000511812 GAGE6Q13070 117 aa11.21□□□□□ -0.61
SMN2-210ENST00000511812 TMEM241Q24JQ0 296 aa11.21□□□□□ -0.61
SMN2-210ENST00000511812 ATRAIDQ6UW56 229 aa11.21□□□□□ -0.61
SMN2-210ENST00000511812 FRZBQ92765 325 aa11.21□□□□□ -0.61
SMN2-210ENST00000511812 FOXA3P55318 350 aaPredicted RBP11.2□□□□□ -0.62
SMN2-210ENST00000511812 IQCJQ1A5X6 159 aa11.2□□□□□ -0.62
SMN2-210ENST00000511812 TSKUQ8WUA8 353 aa11.2□□□□□ -0.62
SMN2-210ENST00000511812 C1orf43Q9BWL3 253 aa11.2□□□□□ -0.62
SMN2-210ENST00000511812 GFRA4Q9GZZ7 299 aa11.2□□□□□ -0.62
SMN2-210ENST00000511812 LECT2O14960 151 aa11.19□□□□□ -0.62
SMN2-210ENST00000511812 Q8N976 141 aa11.19□□□□□ -0.62
SMN2-210ENST00000511812 BAALCQ8WXS3 180 aa11.19□□□□□ -0.62
SMN2-210ENST00000511812 TMEM243Q9BU79 118 aa11.19□□□□□ -0.62
SMN2-210ENST00000511812 SMDT1Q9H4I9 107 aa11.19□□□□□ -0.62
SMN2-210ENST00000511812 RYR1P21817 5038 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 HIGD1CA8MV81 97 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 KRTAP10-1P60331 282 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 RBX1P62877 108 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 COTL1Q14019 142 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 NAT8Q9UHE5 227 aa11.18□□□□□ -0.62
SMN2-210ENST00000511812 UBE2L6O14933 153 aa11.17□□□□□ -0.62
SMN2-210ENST00000511812 ADIRFQ15847 76 aa11.17□□□□□ -0.62
SMN2-210ENST00000511812 ISOC2Q96AB3 205 aa11.17□□□□□ -0.62
SMN2-210ENST00000511812 RPL23P62829 140 aaKnown RBP11.16□□□□□ -0.62
SMN2-210ENST00000511812 WFDC2Q14508 124 aa11.16□□□□□ -0.62
SMN2-210ENST00000511812 MIAQ16674 131 aa11.16□□□□□ -0.62
SMN2-210ENST00000511812 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
SMN2-210ENST00000511812 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
SMN2-210ENST00000511812 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.15□□□□□ -0.62
SMN2-210ENST00000511812 C9JQL5 133 aa11.15□□□□□ -0.62
SMN2-210ENST00000511812 AMTP48728 403 aa11.15□□□□□ -0.62
SMN2-210ENST00000511812 SRSF3P84103 164 aaKnown RBP11.15□□□□□ -0.62
SMN2-210ENST00000511812 RIGQ13278 110 aa11.15□□□□□ -0.62
SMN2-210ENST00000511812 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms