RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 GOLGA4Q13439 2230 aaKnown RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 RALGAPA1Q6GYQ0 2036 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 REV3LO60673 3130 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 OTOGLQ3ZCN5 2332 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 HEATR5BQ9P2D3 2071 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TNRC6BQ9UPQ9 1833 aaKnown RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRBV6-6A0A0A6YYG2 114 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A0G2JRQ6 117 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRBV6-1A0A0K0K1D8 114 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRBV10-3A0A0K0K1G6 114 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 H7BZZ5 65 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 K7EMI3 77 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 LST1O00453 97 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF73O43830 326 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 DNAL4O96015 105 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF137PP52743 207 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZNF138P52744 262 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 EIF4EBP1Q13541 118 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 DEFB109BQ30KR1 87 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 SPINK14Q6IE38 97 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 LINC00596Q86U02 117 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q8N7P7 452 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TOMM6Q96B49 74 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 FAM218AQ96MZ4 157 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 TIMM21Q9BVV7 248 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 Q9H3A6 140 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 PROK2Q9HC23 129 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 DEPPQ9NTK1 212 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 MRPL35Q9NZE8 188 aaKnown RBP3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 LRP4O75096 1905 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 EML5Q05BV3 1969 aa3.36□□□□□ -1.87
HMGB3P13-201ENST00000511263 COL6A3P12111 3177 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 RP1P56715 2156 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 ASCC3Q8N3C0 2202 aaKnown RBP3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 PRUNE2Q8WUY3 3088 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A087WZ39 114 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRAV40A0A0B4J280 105 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 K7EMT4 169 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 TMEM256-PLSCR3K7ERE1 68 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 COX7A2P2O60397 106 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1-5P01602 117 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-30P01768 117 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGHV3-30-5P0DP03 117 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 DSCR10P59022 87 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 RHOHQ15669 191 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 ESRGQ1W209 222 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 LCA10Q71F78 164 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 PHF5AQ7RTV0 110 aaKnown RBP3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 DYNAPQ8N1N2 210 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 C20orf197Q8N268 126 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 FDCSPQ8NFU4 85 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 RNASE6Q93091 150 aaKnown RBP3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 TIMM17AQ99595 171 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 CYSTM1Q9H1C7 97 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 CCL28Q9NRJ3 127 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 CTSZQ9UBR2 303 aa3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 EP300Q09472 2414 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P13-201ENST00000511263 RIF1Q5UIP0 2472 aaKnown RBP3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 IGKV1D-42A0A075B6H8 117 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 TRGV8A0A0C4DH27 118 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 A0A0J9YY99 117 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 D6R8Y8 96 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 CCL3P10147 92 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 RPS27P42677 84 aaKnown RBP3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 CXCL6P80162 114 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 LAGE3Q14657 143 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 SS18Q15532 418 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 MRPL51Q4U2R6 128 aaKnown RBP3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 SFTA2Q6UW10 78 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 SMCR5Q8TEV8 140 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 DCANP1Q8TF63 244 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 TMEM263Q8WUH6 116 aaKnown RBP3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 SPACA5Q96QH8 159 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 TTTY13Q9BZ97 58 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 ICOSQ9Y6W8 199 aa3.34□□□□□ -1.87
HMGB3P13-201ENST00000511263 ZFHX2Q9C0A1 2572 aaPredicted RBP3.34□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGLV4-3A0A075B6K6 122 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGKV1-9A0A0C4DH69 117 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 LOC389332A0A1B0GUA5 103 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 TMEM30CPA0ZSE6 113 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 M0R378 163 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 IGLV3-1P01715 115 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 P0C879 139 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 UBE2AP49459 152 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 BLCAPP62952 87 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 CIRBPQ14011 172 aaKnown RBP3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 Q1T7F1 81 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 LCE3CQ5T5A8 94 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 VMO1Q7Z5L0 202 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 FAM223AQ8IWN6 122 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 Q8N2B8 174 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 Q8N377 158 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 TTTY12Q9BZ98 90 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 CXXC4Q9H2H0 198 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 UBE2D4Q9Y2X8 147 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 BPTFQ12830 3046 aa3.33□□□□□ -1.88
HMGB3P13-201ENST00000511263 AGRNO00468 2067 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 FAM186AA6NE01 2351 aa3.32□□□□□ -1.88
HMGB3P13-201ENST00000511263 A0A0C4DFX4 3053 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms