RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
DDX41-212ENST00000511040 C10orf126Q8N4M7 172 aa9.42□□□□□ -0.9
DDX41-212ENST00000511040 Q9HAA7 133 aa9.42□□□□□ -0.9
DDX41-212ENST00000511040 DNAH11Q96DT5 4516 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 A8MWL6 223 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 K7EP13 123 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 M0QY20 66 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 TMEM241Q24JQ0 296 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 WDR73Q6P4I2 378 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 NFE4Q86UQ8 179 aa9.41□□□□□ -0.9
DDX41-212ENST00000511040 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
DDX41-212ENST00000511040 IBA57-AS1B1ANH7 110 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
DDX41-212ENST00000511040 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 DAZ4Q86SG3 579 aaKnown RBP9.4□□□□□ -0.9
DDX41-212ENST00000511040 COMMD7Q86VX2 200 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 SLC7A5P1Q8MH63 180 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 CNFNQ9BYD5 112 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 DPH3P1Q9H4G8 78 aa9.4□□□□□ -0.9
DDX41-212ENST00000511040 DAZ3Q9NR90 486 aaKnown RBP9.4□□□□□ -0.9
DDX41-212ENST00000511040 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDX41-212ENST00000511040 RPL23P62829 140 aaKnown RBP9.39□□□□□ -0.91
DDX41-212ENST00000511040 ADIRFQ15847 76 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 CT83Q5H943 113 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 ISOC2Q96AB3 205 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 OSTCQ9NRP0 149 aa9.39□□□□□ -0.91
DDX41-212ENST00000511040 KRTAP10-2P60368 255 aa9.38□□□□□ -0.91
DDX41-212ENST00000511040 NIT1Q86X76 327 aa9.38□□□□□ -0.91
DDX41-212ENST00000511040 C15orf54Q8N8G6 183 aa9.38□□□□□ -0.91
DDX41-212ENST00000511040 NAT8Q9UHE5 227 aa9.38□□□□□ -0.91
DDX41-212ENST00000511040 URGCP-MRPS24S4R325 110 aa9.38□□□□□ -0.91
DDX41-212ENST00000511040 HERC2O95714 4834 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 TRAV26-2A0A0B4J265 109 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 HIGD1CA8MV81 97 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 TMEM262E9PQX1 116 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 H7C1H1 209 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 RASL11AQ6T310 242 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 NTM-AS1Q6ZSK4 140 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 DEFB104AQ8WTQ1 72 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 TSKUQ8WUA8 353 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 V9GYV3 84 aa9.37□□□□□ -0.91
DDX41-212ENST00000511040 PSCAO43653 123 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 SMIM15Q7Z3B0 74 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.36□□□□□ -0.91
DDX41-212ENST00000511040 BORCS7Q96B45 105 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 DNAJC30Q96LL9 226 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 CHCHD5Q9BSY4 110 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 SMDT1Q9H4I9 107 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 KIAA1109Q2LD37 5005 aa9.36□□□□□ -0.91
DDX41-212ENST00000511040 A0A087WTM6 91 aa9.35□□□□□ -0.91
DDX41-212ENST00000511040 A0A087WX48 190 aa9.35□□□□□ -0.91
DDX41-212ENST00000511040 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
DDX41-212ENST00000511040 GFRA4Q9GZZ7 299 aa9.35□□□□□ -0.91
DDX41-212ENST00000511040 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
DDX41-212ENST00000511040 A0A1B0GUT8 65 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 EREGO14944 169 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 ADCYAP1P18509 176 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 LAGE3Q14657 143 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 KCNIP4Q6PIL6 250 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 RPL39LQ96EH5 51 aaKnown RBP9.34□□□□□ -0.91
DDX41-212ENST00000511040 NIT2Q9NQR4 276 aa9.34□□□□□ -0.91
DDX41-212ENST00000511040 GAGE6Q13070 117 aa9.33□□□□□ -0.92
DDX41-212ENST00000511040 MPV17L2Q567V2 206 aa9.33□□□□□ -0.92
DDX41-212ENST00000511040 NUP35Q8NFH5 326 aa9.33□□□□□ -0.92
DDX41-212ENST00000511040 TRAV8-3A0A0A6YYJ7 113 aa9.32□□□□□ -0.92
DDX41-212ENST00000511040 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
DDX41-212ENST00000511040 UBE2WQ96B02 151 aa9.32□□□□□ -0.92
DDX41-212ENST00000511040 TRBV25-1A0A075B6N4 114 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 IGHV1-24A0A0C4DH33 117 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 TMEM218A2RU14 115 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 LRCOL1A6NCL2 159 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 FAM231BA6NCW3 169 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 GAS8-AS1O95177 125 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 RIGQ13278 110 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 ATRAIDQ6UW56 229 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 UQCC3Q6UW78 93 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 Q8N976 141 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
DDX41-212ENST00000511040 IGKV2D-24A0A075B6R9 120 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 ANGP03950 147 aaKnown RBP9.3□□□□□ -0.92
DDX41-212ENST00000511040 ELOBQ15370 118 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 IQCJQ1A5X6 159 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 CHCHD7Q9BUK0 85 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 NAT8BQ9UHF3 227 aa9.3□□□□□ -0.92
DDX41-212ENST00000511040 LECT2O14960 151 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 RBX1P62877 108 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 WFDC2Q14508 124 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 CLPSL2Q6UWE3 100 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 AMN1Q8IY45 258 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 MAPKAPK5-AS1Q8N8E1 139 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 RNF185Q96GF1 192 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 TMEM243Q9BU79 118 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 TMEM191AQ9H0A3 160 aa9.29□□□□□ -0.92
DDX41-212ENST00000511040 RAB4AP20338 218 aa9.28□□□□□ -0.92
DDX41-212ENST00000511040 AMTP48728 403 aa9.28□□□□□ -0.92
DDX41-212ENST00000511040 PKIAP61925 76 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms