RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 RPL19P84098 196 aaKnown RBP10.22□□□□□ -0.77
CXCL1-202ENST00000509101 MIAQ16674 131 aa10.22□□□□□ -0.77
CXCL1-202ENST00000509101 CHCHD5Q9BSY4 110 aa10.22□□□□□ -0.77
CXCL1-202ENST00000509101 TMSB15BA0A087X1C1 80 aa10.21□□□□□ -0.77
CXCL1-202ENST00000509101 PEX7O00628 323 aa10.21□□□□□ -0.77
CXCL1-202ENST00000509101 CRIP1P50238 77 aa10.21□□□□□ -0.77
CXCL1-202ENST00000509101 EIF5AP63241 154 aaKnown RBP10.21□□□□□ -0.77
CXCL1-202ENST00000509101 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.77
CXCL1-202ENST00000509101 ZFP82Q8N141 532 aa10.21□□□□□ -0.77
CXCL1-202ENST00000509101 PAGE4O60829 102 aa10.2□□□□□ -0.78
CXCL1-202ENST00000509101 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
CXCL1-202ENST00000509101 OR10G8Q8NGN5 311 aa10.2□□□□□ -0.78
CXCL1-202ENST00000509101 H2AFB1P0C5Y9 115 aa10.19□□□□□ -0.78
CXCL1-202ENST00000509101 CCL20P78556 96 aa10.19□□□□□ -0.78
CXCL1-202ENST00000509101 ZNF56Q15929 161 aa10.19□□□□□ -0.78
CXCL1-202ENST00000509101 CST9LP1Q5W188 147 aa10.19□□□□□ -0.78
CXCL1-202ENST00000509101 NEXN-AS1Q8NBZ9 246 aa10.19□□□□□ -0.78
CXCL1-202ENST00000509101 NKX6-2Q9C056 277 aaPredicted RBP10.19□□□□□ -0.78
CXCL1-202ENST00000509101 PKIAP61925 76 aa10.18□□□□□ -0.78
CXCL1-202ENST00000509101 CIRBPQ14011 172 aaKnown RBP10.18□□□□□ -0.78
CXCL1-202ENST00000509101 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
CXCL1-202ENST00000509101 KRTAP26-1Q6PEX3 210 aa10.18□□□□□ -0.78
CXCL1-202ENST00000509101 HIST1H2BAQ96A08 127 aa10.18□□□□□ -0.78
CXCL1-202ENST00000509101 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
CXCL1-202ENST00000509101 LINC00269Q8N2A0 174 aa10.17□□□□□ -0.78
CXCL1-202ENST00000509101 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
CXCL1-202ENST00000509101 CHTF8P0CG12 524 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 SULT1A2P50226 295 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 RAB4BP61018 213 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 RBX1P62877 108 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 GAGE6Q13070 117 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 ODF1Q14990 250 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 SLC51BQ86UW2 128 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 DPH3P1Q9H4G8 78 aa10.16□□□□□ -0.78
CXCL1-202ENST00000509101 IGLV10-54A0A075B6I4 117 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 A0A087WYN8 130 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 hDV102S1A0JD36 115 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 CNBPP62633 177 aaKnown RBP10.15□□□□□ -0.78
CXCL1-202ENST00000509101 NTM-AS1Q6ZSK4 140 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 COX8CQ7Z4L0 72 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.78
CXCL1-202ENST00000509101 CLRN3Q8NCR9 226 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 DPH3Q96FX2 82 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 ZFP30Q9Y2G7 519 aa10.15□□□□□ -0.78
CXCL1-202ENST00000509101 IGHV3-64A0A075B6Q5 118 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 SCO2A0A1W2PP80 73 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 RAB5CP51148 216 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 NKX2-5P52952 324 aaPredicted RBP10.14□□□□□ -0.79
CXCL1-202ENST00000509101 UBE2G1P62253 170 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 ZNF674Q2M3X9 581 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 EIF5AL1Q6IS14 154 aaKnown RBP10.14□□□□□ -0.79
CXCL1-202ENST00000509101 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 OR10AG1Q8NH19 301 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 FMC1Q96HJ9 113 aa10.14□□□□□ -0.79
CXCL1-202ENST00000509101 TRAV1-1A0A0B4J248 108 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 TRBV6-1A0A0K0K1D8 114 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 PHOX2AO14813 284 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 LTAP01374 205 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 AKR1C3P42330 323 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 SPACA4Q8TDM5 124 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 RNF185Q96GF1 192 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 TCEAL7Q9BRU2 100 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 GNG13Q9P2W3 67 aa10.13□□□□□ -0.79
CXCL1-202ENST00000509101 TMEM97Q5BJF2 176 aa10.12□□□□□ -0.79
CXCL1-202ENST00000509101 DERL1Q9BUN8 251 aa10.12□□□□□ -0.79
CXCL1-202ENST00000509101 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 REG3AQ06141 175 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 C7orf33Q8WU49 177 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 AP5S1Q9NUS5 200 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 VAX2Q9UIW0 290 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
CXCL1-202ENST00000509101 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.1□□□□□ -0.79
CXCL1-202ENST00000509101 MUC21A0A0G2JKD1 596 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 MUC21A0A140T8X8 626 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 F5H697 171 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 SLPIP03973 132 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 ALKAL2Q6UX46 152 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 MANBALQ9NQG1 85 aa10.1□□□□□ -0.79
CXCL1-202ENST00000509101 LINC01600Q96MT4 127 aa10.09□□□□□ -0.79
CXCL1-202ENST00000509101 PLAC8Q9NZF1 115 aa10.09□□□□□ -0.79
CXCL1-202ENST00000509101 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
CXCL1-202ENST00000509101 MLST8Q9BVC4 326 aa10.08□□□□□ -0.8
CXCL1-202ENST00000509101 IGHV1-24A0A0C4DH33 117 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 S100A9P06702 114 aaKnown RBP10.07□□□□□ -0.8
CXCL1-202ENST00000509101 RPL35P42766 123 aaKnown RBP10.07□□□□□ -0.8
CXCL1-202ENST00000509101 SSTP61278 116 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 SPANXN1Q5VSR9 72 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 BAGE2Q86Y30 109 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 C11orf52Q96A22 123 aa10.07□□□□□ -0.8
CXCL1-202ENST00000509101 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
CXCL1-202ENST00000509101 SNAI2O43623 268 aa10.06□□□□□ -0.8
CXCL1-202ENST00000509101 CXCL1P09341 107 aa10.06□□□□□ -0.8
CXCL1-202ENST00000509101 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
CXCL1-202ENST00000509101 GFRA4Q9GZZ7 299 aa10.06□□□□□ -0.8
CXCL1-202ENST00000509101 IGLV4-60A0A075B6I1 120 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 RAB19A4D1S5 217 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 P01737 135 aa10.05□□□□□ -0.8
CXCL1-202ENST00000509101 MEF2BQ02080 365 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms