RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 IGLV1-47P01700 117 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 FAM222AQ5U5X8 452 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 LINC00336Q6ZUF6 198 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 NACAE9PAV3 2078 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 ADARB2-AS1A8MUL3 147 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 BUB1B-PAK6H3BSN5 160 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 NDUFC2O95298 119 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 CTSGP08311 255 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 Q6JHZ5 121 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 LENEPQ9Y5L5 61 aa7.47□□□□□ -1.21
PDGFRA-207ENST00000509092 ICE1Q9Y2F5 2266 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 M0R1W7 72 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 BUB3O43684 328 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 IGHV3-23P01764 117 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 LYPD2Q6UXB3 125 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 KIF25-AS1Q9Y6Z4 181 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 AKAP13Q12802 2813 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 A0A0J9YXV3 536 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 LINC00315P59091 139 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 NPC2P61916 151 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 DEFB104AQ8WTQ1 72 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 C9orf85Q96MD7 179 aa7.46□□□□□ -1.22
PDGFRA-207ENST00000509092 TRAV12-3A0A0B4J271 114 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 TRAV21A0A0B4J279 112 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 EPM2AB3EWF7 344 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 NXPH4O95158 308 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 RPL35AP18077 110 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 PSMB8P28062 276 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 OPRPNQ99935 248 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 PRORYQ9H606 182 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 C22orf24Q9Y442 160 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 CEP295Q9C0D2 2601 aa7.45□□□□□ -1.22
PDGFRA-207ENST00000509092 IGHV3OR16-8A0A075B7F1 116 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 USP17L23D6RBM5 183 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 TIMM17BO60830 172 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 SUMO4Q6EEV6 95 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 NBR2O15453 112 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 FHL2Q14192 279 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 TMEM86BQ8N661 226 aa7.44□□□□□ -1.22
PDGFRA-207ENST00000509092 SEC61GP60059 68 aa7.43□□□□□ -1.22
PDGFRA-207ENST00000509092 MUC4Q99102 2169 aa7.43□□□□□ -1.22
PDGFRA-207ENST00000509092 IGHV1-58A0A0C4DH39 117 aa7.43□□□□□ -1.22
PDGFRA-207ENST00000509092 TMEM178BH3BS89 294 aa7.43□□□□□ -1.22
PDGFRA-207ENST00000509092 MBD3L2Q8NHZ7 208 aaPredicted RBP7.43□□□□□ -1.22
PDGFRA-207ENST00000509092 IGKV3D-7A0A0C4DH55 119 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 RNASE3P12724 160 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 PRIMA1Q86XR5 153 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 LINC01561Q8N1V8 128 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 PKIGQ9Y2B9 76 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 SERP1Q9Y6X1 66 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 ZFHX4Q86UP3 3567 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 CFAP47Q6ZTR5 3102 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 IGLV4-3A0A075B6K6 122 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 TRAV12-2A0A075B6T6 113 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 RS1O15537 224 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 IGF1P05019 195 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 RNASE4P34096 147 aaKnown RBP7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 NPBQ8NG41 125 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 ACACAQ13085 2346 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 PLCE1Q9P212 2302 aa7.42□□□□□ -1.22
PDGFRA-207ENST00000509092 IGHV3-35A0A0C4DH35 117 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 FAM236DA0A1B0GTK5 79 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 DNAL4O96015 105 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 FAM236CP0DP71 79 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 PRB3Q04118 309 aaPredicted RBP7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 VMO1Q7Z5L0 202 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 KAAG1Q9UBP8 84 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 A0A087WVE0 104 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 IGHV3-66A0A0C4DH42 116 aa7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 MRPS36P82909 103 aaKnown RBP7.41□□□□□ -1.22
PDGFRA-207ENST00000509092 APC2O95996 2303 aa7.4□□□□□ -1.22
PDGFRA-207ENST00000509092 FAM223BA6NKX1 122 aa7.4□□□□□ -1.22
PDGFRA-207ENST00000509092 C9orf139Q6ZV77 190 aa7.4□□□□□ -1.22
PDGFRA-207ENST00000509092 C20orf203Q8NBC4 194 aa7.4□□□□□ -1.22
PDGFRA-207ENST00000509092 LOC400499M0QZD8 3231 aa7.4□□□□□ -1.22
PDGFRA-207ENST00000509092 LAMA5O15230 3695 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 GNRH2O43555 120 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 VSIG2Q96IQ7 327 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 TMEM243Q9BU79 118 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 V9GYY9 64 aa7.4□□□□□ -1.23
PDGFRA-207ENST00000509092 DMXL2Q8TDJ6 3036 aa7.39□□□□□ -1.23
PDGFRA-207ENST00000509092 F5H697 171 aa7.39□□□□□ -1.23
PDGFRA-207ENST00000509092 COX7A1P24310 79 aa7.39□□□□□ -1.23
PDGFRA-207ENST00000509092 URB1O60287 2271 aaKnown RBP7.39□□□□□ -1.23
PDGFRA-207ENST00000509092 C16orf92Q96LL3 132 aa7.39□□□□□ -1.23
PDGFRA-207ENST00000509092 FAM223AQ8IWN6 122 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 Q8N2B8 174 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 ITLN2Q8WWU7 325 aaPredicted RBP7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 CCL17Q92583 94 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 UBE2D4Q9Y2X8 147 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 NDPQ00604 133 aa7.38□□□□□ -1.23
PDGFRA-207ENST00000509092 NUP37Q8NFH4 326 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms