RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
LMNA-222ENST00000508500 VPS13BQ7Z7G8 4022 aa10.88□□□□□ -0.67
LMNA-222ENST00000508500 SMIM27A0A1W2PRY6 76 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 EREGO14944 169 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 COX19Q49B96 90 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 UFSP1Q6NVU6 142 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 CDPF1Q6NVV7 123 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 TSKUQ8WUA8 353 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 PRADC1Q9BSG0 188 aa10.87□□□□□ -0.67
LMNA-222ENST00000508500 LRCOL1A6NCL2 159 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 IBA57-AS1B1ANH7 110 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 CXCL1P09341 107 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 LINC00694P0DN24 101 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 FOXA3P55318 350 aaPredicted RBP10.86□□□□□ -0.67
LMNA-222ENST00000508500 Q8N3U1 123 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 C10orf126Q8N4M7 172 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
LMNA-222ENST00000508500 SH2D1AO60880 128 aa10.85□□□□□ -0.67
LMNA-222ENST00000508500 DNLZQ5SXM8 178 aa10.85□□□□□ -0.67
LMNA-222ENST00000508500 LELP1Q5T871 98 aa10.85□□□□□ -0.67
LMNA-222ENST00000508500 ATP6V0E2Q8NHE4 81 aa10.85□□□□□ -0.67
LMNA-222ENST00000508500 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
LMNA-222ENST00000508500 IGHV3-30P01768 117 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 IGHV3-33P01772 117 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 IGHV3-30-3P0DP02 117 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 IGHV3-30-5P0DP03 117 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 LINC01559Q495D7 138 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 PIK3CD-AS1Q5SR53 167 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 DMRTA1Q5VZB9 504 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 RASL11AQ6T310 242 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 OR2D3Q8NGH3 330 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
LMNA-222ENST00000508500 TRAV8-6A0A0B4J262 113 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 GRIFINA4D1Z8 144 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 A8MWV9 139 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 H3BVH4 76 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 S100A4P26447 101 aaKnown RBP10.83□□□□□ -0.68
LMNA-222ENST00000508500 ASIPP42127 132 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 C14orf178Q8N769 122 aaPredicted RBP10.83□□□□□ -0.68
LMNA-222ENST00000508500 URGCP-MRPS24S4R325 110 aa10.83□□□□□ -0.68
LMNA-222ENST00000508500 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 ARMS2P0C7Q2 107 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 RAB5AP20339 215 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 GAGE1Q13065 139 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 GAGE4Q13068 117 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 GAGE5Q13069 117 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 Q9HAA7 133 aa10.82□□□□□ -0.68
LMNA-222ENST00000508500 A0A1B0GW15 77 aa10.8□□□□□ -0.68
LMNA-222ENST00000508500 GCSHP23434 173 aa10.8□□□□□ -0.68
LMNA-222ENST00000508500 DMBT1Q9UGM3 2413 aaPredicted RBP10.8□□□□□ -0.68
LMNA-222ENST00000508500 TGIF2-C20orf24A0A0A6YYL0 155 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 HIGD1CA8MV81 97 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 EPM2AB3EWF7 344 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 F2Z2F3 143 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 WFDC2Q14508 124 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 WDR73Q6P4I2 378 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.79□□□□□ -0.68
LMNA-222ENST00000508500 NUP35Q8NFH5 326 aa10.79□□□□□ -0.68
LMNA-222ENST00000508500 TMSB15BA0A087X1C1 80 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 PSCAO43653 123 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 MT-ND6P03923 174 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 S100A8P05109 93 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 Q8N814 137 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 BORCS7Q96B45 105 aa10.78□□□□□ -0.68
LMNA-222ENST00000508500 A0A087WWL8 130 aa10.77□□□□□ -0.69
LMNA-222ENST00000508500 IGLC6P0CF74 106 aa10.77□□□□□ -0.69
LMNA-222ENST00000508500 RPS10P46783 165 aaKnown RBP10.77□□□□□ -0.69
LMNA-222ENST00000508500 HAMPP81172 84 aa10.77□□□□□ -0.69
LMNA-222ENST00000508500 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
LMNA-222ENST00000508500 GTSF1Q8WW33 167 aa10.77□□□□□ -0.69
LMNA-222ENST00000508500 GNB1LQ9BYB4 327 aa10.77□□□□□ -0.69
LMNA-222ENST00000508500 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
LMNA-222ENST00000508500 IGLV5-52A0A0A0MRZ9 124 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 CTRLP40313 264 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 RIGQ13278 110 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 LAGE3Q14657 143 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 FAM74A4Q5TZK3 123 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 SYT8Q8NBV8 401 aa10.76□□□□□ -0.69
LMNA-222ENST00000508500 A0A1B0GUT8 65 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 C1orf196B1AJZ1 125 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 M0R381 172 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 SMR3BP02814 79 aaPredicted RBP10.75□□□□□ -0.69
LMNA-222ENST00000508500 OR5AL1P0C617 328 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 Q5VSD8 79 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 FER1L6-AS1Q8NA97 138 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 NTN5Q8WTR8 489 aaPredicted RBP10.75□□□□□ -0.69
LMNA-222ENST00000508500 DNAJC30Q96LL9 226 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 SSBP4Q9BWG4 385 aaPredicted RBP10.75□□□□□ -0.69
LMNA-222ENST00000508500 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 PHLDA3Q9Y5J5 127 aa10.75□□□□□ -0.69
LMNA-222ENST00000508500 SRRM2Q9UQ35 2752 aaKnown RBP10.75□□□□□ -0.69
LMNA-222ENST00000508500 A0A1B0GXF2 115 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 RHODO00212 210 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 SNAI2O43623 268 aa10.74□□□□□ -0.69
LMNA-222ENST00000508500 CACNG7P62955 275 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms