RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 FAM223AQ8IWN6 122 aa2.21□□□□□ -2.06
GYPA-205ENST00000508337 Q8N6K4 173 aa2.21□□□□□ -2.06
GYPA-205ENST00000508337 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
GYPA-205ENST00000508337 MARF1Q9Y4F3 1742 aaKnown RBP2.21□□□□□ -2.06
GYPA-205ENST00000508337 KIAA2026Q5HYC2 2103 aa2.21□□□□□ -2.06
GYPA-205ENST00000508337 LRP5O75197 1615 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 TRAV23DV6A0A075B6W5 121 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 H7BZZ5 65 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 SMIM13P0DJ93 91 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 GNGT1P63211 74 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 ZNF56Q15929 161 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 C4orf3Q8WVX3 66 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 DMAC1Q96GE9 116 aa2.2□□□□□ -2.06
GYPA-205ENST00000508337 HEATR5BQ9P2D3 2071 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 MUC4Q99102 2169 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 USP54Q70EL1 1684 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 NUPR2A6NF83 97 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 SDHAF1A6NFY7 115 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 UBE2D1P51668 147 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 EFNA4P52798 201 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 NDUFA11Q86Y39 141 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 FAM167A-AS1Q96KT0 104 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 PTPRMP28827 1452 aa2.19□□□□□ -2.06
GYPA-205ENST00000508337 FREM3P0C091 2139 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 CPAMD8Q8IZJ3 1885 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 FBN1P35555 2871 aaKnown RBP2.18□□□□□ -2.06
GYPA-205ENST00000508337 CACNA1DQ01668 2161 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 F2Z2F3 143 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 UBE2D3P61077 147 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 UBE2D2P62837 147 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 Q5VV11 94 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 LINC00643Q86TS7 51 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 POLA1P09884 1462 aaPredicted RBP2.18□□□□□ -2.06
GYPA-205ENST00000508337 MLH3Q9UHC1 1453 aa2.18□□□□□ -2.06
GYPA-205ENST00000508337 ANKARQ7Z5J8 1434 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 COL24A1Q17RW2 1714 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 SLX4Q8IY92 1834 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 C7orf77A4D0Y5 90 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 ZNF815PA8K554 130 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 PPYP01298 95 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 ACYP1P07311 99 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 COX6CP09669 75 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 CFAP126Q5VTH2 177 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 C20orf197Q8N268 126 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 PATE1Q8WXA2 126 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 PRR14LQ5THK1 2151 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 MED13Q9UHV7 2174 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 PSME4Q14997 1843 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 CHD1O14646 1710 aa2.17□□□□□ -2.06
GYPA-205ENST00000508337 ADAMTS12P58397 1594 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 LAMC3Q9Y6N6 1575 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 IGKV3-7A0A075B6H7 116 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 TMEM14DPA8MWL7 114 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 UMAD1C9J7I0 102 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 PPP1R17O96001 155 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 DNAL4O96015 105 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 VMO1Q7Z5L0 202 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 WFDC10AQ9H1F0 79 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 DYNLRB1Q9NP97 96 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 MYLKQ15746 1914 aa2.16□□□□□ -2.06
GYPA-205ENST00000508337 ATP10BO94823 1461 aa2.15□□□□□ -2.06
GYPA-205ENST00000508337 TRBV25-1A0A075B6N4 114 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 A0A0J9YY99 117 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 BCE1O60756 84 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 SSBP1Q04837 148 aaKnown RBP2.15□□□□□ -2.07
GYPA-205ENST00000508337 SPAG11BQ08648 103 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 KLKP1Q107X0 134 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 TMEM170BQ5T4T1 132 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 SPAG11AQ6PDA7 123 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 PSENENQ9NZ42 101 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 SMARCA4P51532 1647 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 TRPM7Q96QT4 1865 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 LAMB4A4D0S4 1761 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 CCDC88CQ9P219 2028 aa2.15□□□□□ -2.07
GYPA-205ENST00000508337 PARP14Q460N5 1801 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 SHANK2Q9UPX8 1470 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 MON2Q7Z3U7 1717 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 ABCA3Q99758 1704 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.14□□□□□ -2.07
GYPA-205ENST00000508337 PCNX2A6NKB5 2137 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 ARHGEF12Q9NZN5 1544 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 TRBV6-7A0A0A0MS04 114 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 LOC101927531A0A1B0GV80 90 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 TRBV6-4A0A1B0GX49 114 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 HIGD1CA8MV81 97 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 IQCF6A8MYZ5 107 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 C10orf142B7Z368 130 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 F8WEM9 126 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 HMGN4O00479 90 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 SPINT3P49223 89 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 SPACA4Q8TDM5 124 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 CDC42SE2Q9NRR3 84 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 NDUFA4L2Q9NRX3 87 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 TMEM14BQ9NUH8 114 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 KLK9Q9UKQ9 250 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 ARL2-SNX15V9GYD0 113 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 RP1P56715 2156 aa2.14□□□□□ -2.07
GYPA-205ENST00000508337 MICAL3Q7RTP6 2002 aa2.13□□□□□ -2.07
GYPA-205ENST00000508337 SLIT2O94813 1529 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms