RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 MRPL35Q9NZE8 188 aaKnown RBP5.09□□□□□ -1.59
PDGFRA-206ENST00000508170 ALPK2Q86TB3 2170 aa5.09□□□□□ -1.6
PDGFRA-206ENST00000508170 IGKV1D-42A0A075B6H8 117 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 IGKV2D-26A0A0A0MRZ7 120 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 C10orf142B7Z368 130 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 LINC01565O15544 149 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 MDKP21741 143 aaPredicted RBP5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 CACNA1CQ13936 2221 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 CACNA1IQ9P0X4 2223 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 IGLV7-46A0A075B6I9 117 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 A6NDX4 124 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 IGHV1-46P01743 117 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 ASAH2BP0C7U1 165 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 SMIM13P0DJ93 91 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 MRPS21P82921 87 aaKnown RBP5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 SYCNQ0VAF6 134 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 DEFB110Q30KQ9 67 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 TMEM136Q6ZRR5 245 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 C2orf91Q6ZV80 131 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 FAM19A2Q8N3H0 131 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 CYB561D1Q8N8Q1 229 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 Q8N9W7 124 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 C1orf64Q8NEQ6 169 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 CMTM2Q8TAZ6 248 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 NDUFA12Q9UI09 145 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 SEC16AO15027 2179 aa5.08□□□□□ -1.6
PDGFRA-206ENST00000508170 IGHV3-73A0A0B4J1V6 119 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 CRYM-AS1A6NIL9 109 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 ZNF20P17024 532 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 NNATQ16517 81 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 FAM229BQ4G0N7 80 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 MUC6Q6W4X9 2439 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 ZNF407Q9C0G0 2248 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 IGHV1-3A0A0C4DH29 117 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 SPTY2D1-AS1A0A0U1RR47 76 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 CLPSP04118 112 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 DEFA4P12838 97 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 UBE2G1P62253 170 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 ZNF117Q03924 483 aa5.07□□□□□ -1.6
PDGFRA-206ENST00000508170 ARID1AO14497 2285 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 IGHV4-34P06331 123 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 ROMO1P60602 79 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 LYZP61626 148 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 KLHL30-AS1Q8NEE0 82 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 R4GMQ9 66 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 WDR87Q6ZQQ6 2873 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 RP1P56715 2156 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 WDFY4Q6ZS81 3184 aa5.06□□□□□ -1.6
PDGFRA-206ENST00000508170 LYPD5Q6UWN5 251 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 SMIM7Q9BQ49 75 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 LINC00574Q9H8X3 128 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 SVILO95425 2214 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 USP34Q70CQ2 3546 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 THADAQ6YHU6 1953 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 C11orf94C9JXX5 98 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 TREML4Q6UXN2 200 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 LYPD6Q86Y78 171 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 Q8N377 158 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 DYNLRB2Q8TF09 96 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 LINC01600Q96MT4 127 aa5.05□□□□□ -1.6
PDGFRA-206ENST00000508170 KIF26BQ2KJY2 2108 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 IGHV3-15A0A0B4J1V0 119 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 TMEM14DPA8MWL7 114 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 IGLV3-19P01714 112 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 MSMBP08118 114 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 XCL1P47992 114 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 EFNA4P52798 201 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 C1orf134Q5TEV5 83 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 SPANXN1Q5VSR9 72 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 TMEM141Q96I45 108 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 ARHGAP5-AS1Q96IT6 56 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 ATRXP46100 2492 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 PCDH15Q96QU1 1955 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 PIGBOS1A0A0B4J2F0 54 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 hDV103S1A0JD37 113 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 LYZL1Q6UWQ5 148 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 Q6ZTC4 211 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 LYZL2Q7Z4W2 148 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 CYYR1Q96J86 154 aa5.04□□□□□ -1.6
PDGFRA-206ENST00000508170 VPS13AQ96RL7 3174 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 A0A0B4J2C4 111 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 IGKV3-11P04433 115 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 ESRGQ1W209 222 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 DEFB126Q9BYW3 111 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 GNG13Q9P2W3 67 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 FREM3P0C091 2139 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 IGKV3D-11A0A0A0MRZ8 115 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 TRAV3A0A0B4J244 114 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 FSHBP01225 129 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 RPRMLQ8N4K4 120 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 MIR7-3HGQ8N6C7 128 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 LINC00467Q9BRT7 94 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 ICOSQ9Y6W8 199 aa5.03□□□□□ -1.6
PDGFRA-206ENST00000508170 PTPRBP23467 1997 aa5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 F2Z2F3 143 aa5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 P0C879 139 aa5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 PLA2G2AP14555 144 aa5.02□□□□□ -1.61
PDGFRA-206ENST00000508170 CYP2G1PQ6ZSU1 146 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms