RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 RIF1Q5UIP0 2472 aaKnown RBP0.31□□□□□ -2.36
GYPB-207ENST00000506679 FRAS1Q86XX4 4008 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 ERCC6Q03468 1493 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 K7ERU9 68 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 LINC00694P0DN24 101 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 SSBP1Q04837 148 aaKnown RBP0.31□□□□□ -2.36
GYPB-207ENST00000506679 SPANXN1Q5VSR9 72 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 PFDN5Q99471 154 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 ADGRB1O14514 1584 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 EP400Q96L91 3159 aa0.31□□□□□ -2.36
GYPB-207ENST00000506679 EP300Q09472 2414 aaPredicted RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 AKAP11Q9UKA4 1901 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 SPEGQ15772 3267 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 MYO9AB2RTY4 2548 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 PTPRMP28827 1452 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 CEP295Q9C0D2 2601 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 FAM236AA0A1B0GUQ0 79 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 FAM236BA0A1B0GV22 79 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 PRH1P02810 166 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 COX4I1P13073 169 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 GUCA1AP43080 201 aaPredicted RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 ELOF1P60002 83 aaKnown RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 RRAS2P62070 204 aaPredicted RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 EMX2Q04743 252 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 SPCS2Q15005 226 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 FAM74A4Q5TZK3 123 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 LINC01545Q5VT33 79 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 TSKUQ8WUA8 353 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 IFI27L1Q96BM0 104 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 TCEAL4Q96EI5 215 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 PSMG3Q9BT73 122 aaPredicted RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 GVINP1Q7Z2Y8 2422 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 DMBT1Q9UGM3 2413 aaPredicted RBP0.3□□□□□ -2.36
GYPB-207ENST00000506679 TEX15Q9BXT5 2789 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 FAT3Q8TDW7 4589 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 REV3LO60673 3130 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 TMEM2Q9UHN6 1383 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 NRXN2Q9P2S2 1712 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 DAPK1P53355 1430 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
GYPB-207ENST00000506679 CFAP47Q6ZTR5 3102 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 RELNP78509 3460 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 PHIPQ8WWQ0 1821 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 A6NIN4 97 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 F2Z2F3 143 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 NPFFO15130 113 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 CCL3L1P16619 93 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 MIC13Q5XKP0 118 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 Q6ZUT4 128 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 TSTD1Q8NFU3 115 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 SMR3AQ99954 134 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 PRR15LQ9BU68 103 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 BPESC1Q9GZL8 116 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 TMEM191AQ9H0A3 160 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 NDUFA12Q9UI09 145 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 EYSQ5T1H1 3165 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 TNS1Q9HBL0 1735 aaKnown RBP0.29□□□□□ -2.36
GYPB-207ENST00000506679 ZFHX3Q15911 3703 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 DNAH12Q6ZR08 3092 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 PCNX1Q96RV3 2341 aa0.29□□□□□ -2.36
GYPB-207ENST00000506679 RANBP2P49792 3224 aaKnown RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 MXRA5Q9NR99 2828 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 CDK13Q14004 1512 aaKnown RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 TLN1Q9Y490 2541 aaKnown RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 KDM6BO15054 1643 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 UNC80Q8N2C7 3258 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 TRAV12-3A0A0B4J271 114 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 IFNA17P01571 189 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 PIRTP0C851 137 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 PIPP12273 146 aaPredicted RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 COPZ1P61923 177 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 RPS25P62851 125 aaKnown RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 S100A12P80511 92 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 RPL7L1Q6DKI1 246 aaKnown RBP0.28□□□□□ -2.36
GYPB-207ENST00000506679 SLC48A1Q6P1K1 146 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 TPT1P8Q9HAU6 139 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 RPRMQ9NS64 109 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 CCDC167Q9P0B6 97 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 PDE4DIPQ5VU43 2346 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 COL7A1Q02388 2944 aa0.28□□□□□ -2.36
GYPB-207ENST00000506679 HIVEP1P15822 2718 aa0.28□□□□□ -2.37
GYPB-207ENST00000506679 ABCA4P78363 2273 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 CACNA1HO95180 2353 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 MUC22E2RYF6 1773 aaPredicted RBP0.27□□□□□ -2.37
GYPB-207ENST00000506679 DCHS1Q96JQ0 3298 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 SPEF2Q9C093 1822 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 MYH9P35579 1960 aaKnown RBP0.27□□□□□ -2.37
GYPB-207ENST00000506679 TFF1P04155 84 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 NPC2P61916 151 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 C9orf116Q5BN46 136 aaPredicted RBP0.27□□□□□ -2.37
GYPB-207ENST00000506679 SPINK6Q6UWN8 80 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 VMO1Q7Z5L0 202 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 C4orf33Q8N1A6 199 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 C20orf197Q8N268 126 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 KCNRGQ8N5I3 272 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 SMIM11BQ8TCY0 68 aa0.27□□□□□ -2.37
GYPB-207ENST00000506679 COX7B2Q8TF08 81 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms