RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SORL1Q92673 2214 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 DNAH17Q9UFH2 4485 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 HSPG2P98160 4391 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 LRP1BQ9NZR2 4599 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 DNAH5Q8TE73 4624 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 HERC1Q15751 4861 aa1.6□□□□□ -2.15
TRAPPC11-205ENST00000506426 APOBP04114 4563 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 A0A0J9YX75 114 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 IGLC7A0M8Q6 106 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 IRGMA1A4Y4 181 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 MEIS3P1A6NDR6 274 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 M0R2N4 97 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 LST1O00453 97 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 ZNF73O43830 326 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 ATP5HO75947 161 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 NPYP01303 97 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 CTSDP07339 412 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 CTXN2P0C2S0 81 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 DEFA4P12838 97 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 HIST1H1DP16402 221 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 XCL1P47992 114 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 AQP4P55087 323 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 FXYD4P59646 89 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 RANP62826 216 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 CTAG1AP78358 180 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 SPINK9Q5DT21 86 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 TTC9CQ8N5M4 171 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 OR13C8Q8NGS7 320 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 TMEM167AQ8TBQ9 72 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 CNBD2Q96M20 576 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 C20orf166-AS1Q96NR2 134 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 CCDC90BQ9GZT6 254 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 ATG5Q9H1Y0 275 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 PRELID1Q9Y255 219 aa1.59□□□□□ -2.15
TRAPPC11-205ENST00000506426 PKD1P98161 4303 aa1.59□□□□□ -2.16
TRAPPC11-205ENST00000506426 SDHAF1A6NFY7 115 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 OR4C46A6NHA9 309 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 IFITM5A6NNB3 132 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 KNCNA6PVL3 124 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 INMT-MINDY4F8WBC2 141 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 K7EIM0 57 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 CREBL2O60519 120 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 PRB4P10163 310 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 LGALS3P17931 250 aaKnown RBP1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 GNG2P59768 71 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 ARPC4P59998 168 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 DEFB1P60022 68 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 WT1-ASQ06250 92 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 Q56UQ5 140 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 AADACL3Q5VUY0 350 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 ZNF818PQ6ZRF7 136 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 PACRGLQ8N7B6 248 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 GDPD1Q8N9F7 314 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 OR5H6Q8NGV6 325 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 RHPN1-AS1Q9BWJ2 59 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 PSORS1C2Q9UIG4 136 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 UFC1Q9Y3C8 167 aa1.58□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRBV7-1A0A0A6YYK4 115 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 A8MUN3 132 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 PLA2G10O15496 165 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 DHFRP00374 187 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 PPYP01298 95 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 FGF6P10767 208 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 HTN3P15516 51 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 HLA-DMBP28068 263 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 G6PCP35575 357 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 EMP1P54849 157 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 FXYD7P58549 80 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 DEFB131AP59861 70 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 POLR2GP62487 172 aaKnown RBP eCLIP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 AKR1C1Q04828 323 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 ACOT6Q3I5F7 207 aaPredicted RBP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 HACD4Q5VWC8 232 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 IZUMO2Q6UXV1 221 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 VSTM2AQ8TAG5 236 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 SMCR5Q8TEV8 140 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 LSM10Q969L4 123 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 COMMD5Q9GZQ3 224 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 FXYD6Q9H0Q3 95 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 C11orf68Q9H3H3 251 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 NDUFB11Q9NX14 153 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 BET1LQ9NYM9 111 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 MRPL36Q9P0J6 103 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 MRPL27Q9P0M9 148 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 RABAC1Q9UI14 185 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 APLNQ9ULZ1 77 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 PRELID3BQ9Y3B1 194 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 UBR4Q5T4S7 5183 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
TRAPPC11-205ENST00000506426 SMIM9A6NGZ8 99 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 C11orf86A6NJI1 115 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 I3L2K1 104 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 NDUFA4O00483 81 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 PDCD5O14737 125 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 GNRH2O43555 120 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 GNG7O60262 68 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 PMP2P02689 132 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 IFNA4P05014 189 aa1.56□□□□□ -2.16
TRAPPC11-205ENST00000506426 TRAPPC2P0DI81 140 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms