RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MANBALQ9NQG1 85 aa13.08□□□□□ -0.32
UBE2D3-220ENST00000505307 AP1S3Q96PC3 154 aa13.07□□□□□ -0.32
UBE2D3-220ENST00000505307 VAX2Q9UIW0 290 aa13.07□□□□□ -0.32
UBE2D3-220ENST00000505307 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 ENHOQ6UWT2 76 aa13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 C15orf54Q8N8G6 183 aa13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 C11orf52Q96A22 123 aa13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 CHCHD5Q9BSY4 110 aa13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 CHAC1Q9BUX1 264 aa13.06□□□□□ -0.32
UBE2D3-220ENST00000505307 TRAV1-1A0A0B4J248 108 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 J3QL48 77 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 ANGP03950 147 aaKnown RBP13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 RAB5CP51148 216 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 LINC01620Q4KN68 170 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 MPV17L2Q567V2 206 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 SCXQ7RTU7 201 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 DEFB104AQ8WTQ1 72 aa13.05□□□□□ -0.32
UBE2D3-220ENST00000505307 TEX46H3BTG2 121 aa13.04□□□□□ -0.32
UBE2D3-220ENST00000505307 RPS20P60866 119 aaKnown RBP13.04□□□□□ -0.32
UBE2D3-220ENST00000505307 MIAQ16674 131 aa13.04□□□□□ -0.32
UBE2D3-220ENST00000505307 KIF25-AS1Q9Y6Z4 181 aa13.04□□□□□ -0.32
UBE2D3-220ENST00000505307 MUC21A0A0G2JKD1 596 aa13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 MUC21A0A140T8X8 626 aa13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 EIF5AL1Q6IS14 154 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 DAZAP1Q96EP5 407 aaKnown RBP13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 SMIM12Q96EX1 92 aa13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 GNG13Q9P2W3 67 aa13.03□□□□□ -0.32
UBE2D3-220ENST00000505307 H7C1H1 209 aa13.02□□□□□ -0.33
UBE2D3-220ENST00000505307 TRBV25-1A0A075B6N4 114 aa13.01□□□□□ -0.33
UBE2D3-220ENST00000505307 SSTP61278 116 aa13.01□□□□□ -0.33
UBE2D3-220ENST00000505307 CACNG7P62955 275 aa13.01□□□□□ -0.33
UBE2D3-220ENST00000505307 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
UBE2D3-220ENST00000505307 DERL1Q9BUN8 251 aa13.01□□□□□ -0.33
UBE2D3-220ENST00000505307 XKRY2A2RUG3 117 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 KRTAP29-1A8MX34 341 aaPredicted RBP13□□□□□ -0.33
UBE2D3-220ENST00000505307 IGLC6P0CF74 106 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 CCL20P78556 96 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 CENPWQ5EE01 88 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 FER1L6-AS1Q8NA97 138 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 PRR34Q9NV39 138 aa13□□□□□ -0.33
UBE2D3-220ENST00000505307 F2Z2F3 143 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 RBX1P62877 108 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 IQCJQ1A5X6 159 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 OR2D3Q8NGH3 330 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 CIRBP-AS1Q8TBR5 109 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 BIN3Q9NQY0 253 aa12.99□□□□□ -0.33
UBE2D3-220ENST00000505307 IGHV1-24A0A0C4DH33 117 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 USP17L23D6RBM5 183 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 M0QY20 66 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 PDE6DO43924 150 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 IGLV2-8P01709 118 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 GNG4P50150 75 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 DGAT2L7PQ6IED9 249 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 TPPP3Q9BW30 176 aa12.98□□□□□ -0.33
UBE2D3-220ENST00000505307 C19orf71A6NCJ1 209 aa12.97□□□□□ -0.33
UBE2D3-220ENST00000505307 HLA-DQA1P01909 254 aa12.97□□□□□ -0.33
UBE2D3-220ENST00000505307 IFNA1P01562 189 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 MGPP08493 103 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 GZMBP10144 247 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 SULT1A2P50226 295 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 MEF2BQ02080 365 aaPredicted RBP12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 GAGE6Q13070 117 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 LINC00269Q8N2A0 174 aa12.96□□□□□ -0.33
UBE2D3-220ENST00000505307 P01737 135 aa12.95□□□□□ -0.34
UBE2D3-220ENST00000505307 TRGC1P0CF51 173 aa12.95□□□□□ -0.34
UBE2D3-220ENST00000505307 SUMO4Q6EEV6 95 aa12.94□□□□□ -0.34
UBE2D3-220ENST00000505307 CLRN3Q8NCR9 226 aa12.94□□□□□ -0.34
UBE2D3-220ENST00000505307 TRAV8-4A0A0B4J246 113 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 RAB19A4D1S5 217 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 PRSS1P07477 247 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 WDR73Q6P4I2 378 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 RASL11AQ6T310 242 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 C9orf163Q8N9P6 203 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 MED9Q9NWA0 146 aa12.93□□□□□ -0.34
UBE2D3-220ENST00000505307 A0A1B0GUV1 79 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 KRTAP10-4P60372 401 aaPredicted RBP12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 REG3AQ06141 175 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 KRTAP26-1Q6PEX3 210 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 PGLYRP4Q96LB8 373 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 TMEM243Q9BU79 118 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 DPH3P1Q9H4G8 78 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 NIT2Q9NQR4 276 aa12.92□□□□□ -0.34
UBE2D3-220ENST00000505307 BCL2P10415 239 aa12.91□□□□□ -0.34
UBE2D3-220ENST00000505307 NKX2-5P52952 324 aaPredicted RBP12.91□□□□□ -0.34
UBE2D3-220ENST00000505307 CLPSL2Q6UWE3 100 aa12.91□□□□□ -0.34
UBE2D3-220ENST00000505307 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
UBE2D3-220ENST00000505307 C9orf62Q8N4C0 152 aa12.91□□□□□ -0.34
UBE2D3-220ENST00000505307 NTF3P20783 257 aa12.9□□□□□ -0.34
UBE2D3-220ENST00000505307 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
UBE2D3-220ENST00000505307 OXTP01178 125 aa12.89□□□□□ -0.35
UBE2D3-220ENST00000505307 SLC51BQ86UW2 128 aa12.89□□□□□ -0.35
UBE2D3-220ENST00000505307 CTRLP40313 264 aa12.88□□□□□ -0.35
UBE2D3-220ENST00000505307 TCTE3Q8IZS6 198 aa12.88□□□□□ -0.35
UBE2D3-220ENST00000505307 C20orf203Q8NBC4 194 aa12.88□□□□□ -0.35
UBE2D3-220ENST00000505307 NUDT10Q8NFP7 164 aa12.87□□□□□ -0.35
UBE2D3-220ENST00000505307 NUDT11Q96G61 164 aa12.87□□□□□ -0.35
UBE2D3-220ENST00000505307 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
UBE2D3-220ENST00000505307 IGLV10-54A0A075B6I4 117 aa12.86□□□□□ -0.35
UBE2D3-220ENST00000505307 UBE2L6O14933 153 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 180.7 ms