RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 MRPS16Q9Y3D3 137 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-208ENST00000504489 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 M0QY20 66 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 MGPP08493 103 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 GAGE1Q13065 139 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 GAGE4Q13068 117 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 GAGE5Q13069 117 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 GAGE13Q4V321 117 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 UPK3BQ9BT76 320 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 DNAH6Q9C0G6 4158 aa8.2□□□□□ -1.1
PDLIM5-208ENST00000504489 TRBV7-3A0A075B6L6 115 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 A0A1B0GW15 77 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 H7C1H1 209 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 SUMO4Q6EEV6 95 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 NEXN-AS1Q8NBZ9 246 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 ZNRF2Q8NHG8 242 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 FRZBQ92765 325 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 IMMP2LQ96T52 175 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 KRTAP4-12Q9BQ66 201 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 CTDSP1Q9GZU7 261 aa8.19□□□□□ -1.1
PDLIM5-208ENST00000504489 CLRN3Q8NCR9 226 aa8.18□□□□□ -1.1
PDLIM5-208ENST00000504489 DNAJC30Q96LL9 226 aa8.18□□□□□ -1.1
PDLIM5-208ENST00000504489 GTSF1LQ9H1H1 148 aa8.18□□□□□ -1.1
PDLIM5-208ENST00000504489 A0A087WWC5 75 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 A0A1B0GXF2 115 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 C7orf77A4D0Y5 90 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 UBE2D3P61077 147 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 UBE2D2P62837 147 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 NDUFA5Q16718 116 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 RASL11AQ6T310 242 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 ATP5L2Q7Z4Y8 100 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 Q9H8V8 135 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 NIT2Q9NQR4 276 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 TMEM242Q9NWH2 141 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
PDLIM5-208ENST00000504489 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 S100A8P05109 93 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 RAB4AP20338 218 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 CAMPP49913 170 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 HBBP68871 147 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 RHEBQ15382 184 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 SLC7A5P1Q8MH63 180 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 GATD1Q8NB37 220 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 RNF185Q96GF1 192 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 TNFRSF18Q9Y5U5 241 aa8.16□□□□□ -1.1
PDLIM5-208ENST00000504489 APOC3P02656 99 aa8.15□□□□□ -1.1
PDLIM5-208ENST00000504489 LELP1Q5T871 98 aa8.15□□□□□ -1.1
PDLIM5-208ENST00000504489 MRPL54Q6P161 138 aaKnown RBP8.15□□□□□ -1.1
PDLIM5-208ENST00000504489 AMN1Q8IY45 258 aa8.15□□□□□ -1.1
PDLIM5-208ENST00000504489 BTF3L4Q96K17 158 aa8.15□□□□□ -1.1
PDLIM5-208ENST00000504489 TRAV9-1A0A075B6T8 112 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 SIVA1O15304 175 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 SNAPINO95295 136 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 FAM104BQ5XKR9 115 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 KCNIP4Q6PIL6 250 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 DAZ4Q86SG3 579 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 SVBPQ8N300 66 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 MRAP2Q96G30 205 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 RPS10P5Q9NQ39 176 aa8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 DAZ3Q9NR90 486 aaKnown RBP8.14□□□□□ -1.11
PDLIM5-208ENST00000504489 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
PDLIM5-208ENST00000504489 TRAV8-6A0A0B4J262 113 aa8.13□□□□□ -1.11
PDLIM5-208ENST00000504489 TMEM97Q5BJF2 176 aa8.13□□□□□ -1.11
PDLIM5-208ENST00000504489 LCE3BQ5TA77 95 aa8.13□□□□□ -1.11
PDLIM5-208ENST00000504489 Q6ZR54 194 aa8.13□□□□□ -1.11
PDLIM5-208ENST00000504489 TRBV6-5A0A0K0K1A5 114 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 NBDYA0A0U1RRE5 68 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 DNAH10OSP0CZ25 163 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 S100PP25815 95 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 MRPL51Q4U2R6 128 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 OR10J3Q5JRS4 329 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 WFDC10BQ8IUB3 73 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 RPL39LQ96EH5 51 aaKnown RBP8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 RYR2Q92736 4967 aa8.12□□□□□ -1.11
PDLIM5-208ENST00000504489 TRBV6-8A0A0A6YYG3 113 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 IGHV3-38A0A0C4DH36 116 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 K7EP13 123 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 M0R2N4 97 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 GAS8-AS1O95177 125 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 TTC32Q5I0X7 151 aa8.11□□□□□ -1.11
PDLIM5-208ENST00000504489 PPP1R17O96001 155 aa8.1□□□□□ -1.11
PDLIM5-208ENST00000504489 LINC01556Q5JQF7 62 aa8.1□□□□□ -1.11
PDLIM5-208ENST00000504489 NTM-AS1Q6ZSK4 140 aa8.1□□□□□ -1.11
PDLIM5-208ENST00000504489 NRACQ8N912 160 aa8.1□□□□□ -1.11
PDLIM5-208ENST00000504489 TRAV9-2A0A087WT02 112 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 SDHAF1A6NFY7 115 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 SMKR1H3BMG3 65 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 PPBPP02775 128 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 CKS2P33552 79 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 RPS10P46783 165 aaKnown RBP8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 ST20Q9HBF5 79 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 URGCP-MRPS24S4R325 110 aa8.09□□□□□ -1.11
PDLIM5-208ENST00000504489 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
PDLIM5-208ENST00000504489 NCR2O95944 276 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms