RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 ZFP2Q6ZN57 461 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 TSKUQ8WUA8 353 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 SAMD10Q9BYL1 202 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 XKRY2A2RUG3 117 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 LRCOL1A6NCL2 159 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 CRYGDP07320 174 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 FAM162BQ5T6X4 162 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 DMRTA1Q5VZB9 504 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 NFE4Q86UQ8 179 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 NAT8BQ9UHF3 227 aa9.39□□□□□ -0.91
PDLIM7-211ENST00000504318 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 H3BVH4 76 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 EVI2AP22794 236 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 LELP1Q5T871 98 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 WDR73Q6P4I2 378 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 RASL11AQ6T310 242 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 Q8N1X5 172 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 MAPKAPK5-AS1Q8N8E1 139 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 PRADC1Q9BSG0 188 aa9.38□□□□□ -0.91
PDLIM7-211ENST00000504318 TRAV9-2A0A087WT02 112 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 A8MWV9 139 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 IBA57-AS1B1ANH7 110 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 MT-ND6P03923 174 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 ASIPP42127 132 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 Q8N3U1 123 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 C10orf126Q8N4M7 172 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 C14orf178Q8N769 122 aaPredicted RBP9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 GTSF1LQ9H1H1 148 aa9.37□□□□□ -0.91
PDLIM7-211ENST00000504318 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 S100A6P06703 90 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 ARMS2P0C7Q2 107 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 XGP55808 180 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 CDPF1Q6NVV7 123 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 PGPEP1Q9NXJ5 209 aa9.36□□□□□ -0.91
PDLIM7-211ENST00000504318 DNAH8Q96JB1 4490 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 GRIFINA4D1Z8 144 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 HIGD1CA8MV81 97 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 TRGC2P03986 189 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 S100A4P26447 101 aaKnown RBP9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
PDLIM7-211ENST00000504318 ZFP82Q8N141 532 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 NUP35Q8NFH5 326 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 BORCS7Q96B45 105 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 GNB1LQ9BYB4 327 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 FAT1Q14517 4588 aa9.34□□□□□ -0.91
PDLIM7-211ENST00000504318 A0A1B0GW15 77 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 GAGE12JA6NER3 117 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 HLA-DQA1P01909 254 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 S100A8P05109 93 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 FOXA3P55318 350 aaPredicted RBP9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 GAGE1Q13065 139 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 GAGE4Q13068 117 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 GAGE5Q13069 117 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 GAGE13Q4V321 117 aa9.33□□□□□ -0.92
PDLIM7-211ENST00000504318 TRAV8-6A0A0B4J262 113 aa9.32□□□□□ -0.92
PDLIM7-211ENST00000504318 LAGE3Q14657 143 aa9.32□□□□□ -0.92
PDLIM7-211ENST00000504318 OR10J3Q5JRS4 329 aa9.32□□□□□ -0.92
PDLIM7-211ENST00000504318 FRZBQ92765 325 aa9.32□□□□□ -0.92
PDLIM7-211ENST00000504318 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 RHODO00212 210 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 PHOX2AO14813 284 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 SNAI2O43623 268 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 IGHV3-30P01768 117 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 IGHV3-33P01772 117 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 IGHV3-30-3P0DP02 117 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 IGHV3-30-5P0DP03 117 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 HBBP68871 147 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 WFDC2Q14508 124 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 MRPL54Q6P161 138 aaKnown RBP9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 GTSF1Q8WW33 167 aa9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 SSBP4Q9BWG4 385 aaPredicted RBP9.31□□□□□ -0.92
PDLIM7-211ENST00000504318 A0A087WWL8 130 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 LOC105371267A0A1B0GV96 52 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BKO60814 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BJP06899 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BOP23527 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BBP33778 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BDP58876 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BCP62807 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 FABP9Q0Z7S8 132 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 RIGQ13278 110 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST2H2BEQ16778 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BHQ93079 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 PGLYRP4Q96LB8 373 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BNQ99877 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 HIST1H2BMQ99879 126 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 MRPL18Q9H0U6 180 aaKnown RBP9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 PHLDA3Q9Y5J5 127 aa9.3□□□□□ -0.92
PDLIM7-211ENST00000504318 A0A1B0GUT8 65 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 A0A1B0GXF2 115 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 M0R381 172 aa9.29□□□□□ -0.92
PDLIM7-211ENST00000504318 EREGO14944 169 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms