RNA–Protein interactions for RNA: ENST00000504101.1

POLR2J3-208, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-208ENST00000504101 RNF185Q96GF1 192 aa10.72□□□□□ -0.69
POLR2J3-208ENST00000504101 IGLV10-54A0A075B6I4 117 aa10.71□□□□□ -0.69
POLR2J3-208ENST00000504101 OR10AG1Q8NH19 301 aa10.71□□□□□ -0.69
POLR2J3-208ENST00000504101 DERL1Q9BUN8 251 aa10.71□□□□□ -0.69
POLR2J3-208ENST00000504101 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
POLR2J3-208ENST00000504101 TRBV25-1A0A075B6N4 114 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 TRBV6-1A0A0K0K1D8 114 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 F5H697 171 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 LTAP01374 205 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 REG3AQ06141 175 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 SPACA4Q8TDM5 124 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 ZNF471Q9BX82 626 aaPredicted RBP10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 AP5S1Q9NUS5 200 aa10.7□□□□□ -0.7
POLR2J3-208ENST00000504101 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.69□□□□□ -0.7
POLR2J3-208ENST00000504101 PHOX2AO14813 284 aa10.69□□□□□ -0.7
POLR2J3-208ENST00000504101 C7orf33Q8WU49 177 aa10.69□□□□□ -0.7
POLR2J3-208ENST00000504101 A6NHS1 94 aa10.68□□□□□ -0.7
POLR2J3-208ENST00000504101 SLPIP03973 132 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 DEFA1P59665 94 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 DEFA3P59666 94 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 IQCJQ1A5X6 159 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 SPANXN1Q5VSR9 72 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 RPL7L1Q6DKI1 246 aaKnown RBP10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 LINC01600Q96MT4 127 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 PLAC8Q9NZF1 115 aa10.67□□□□□ -0.7
POLR2J3-208ENST00000504101 TRAV8-4A0A0B4J246 113 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 MUC21A0A0G2JKD1 596 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 MUC21A0A140T8X8 626 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 P01737 135 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 CXCL1P09341 107 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 AKR1C3P42330 323 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 ODF1Q14990 250 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 TCEAL7Q9BRU2 100 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 KIF25-AS1Q9Y6Z4 181 aa10.66□□□□□ -0.7
POLR2J3-208ENST00000504101 BORCS7-ASMTA0A0B4J1R7 106 aa10.65□□□□□ -0.7
POLR2J3-208ENST00000504101 SNAI2O43623 268 aa10.65□□□□□ -0.7
POLR2J3-208ENST00000504101 AKR1C8PQ5T2L2 129 aa10.65□□□□□ -0.7
POLR2J3-208ENST00000504101 C20orf203Q8NBC4 194 aa10.65□□□□□ -0.7
POLR2J3-208ENST00000504101 MAP1LC3B2A6NCE7 125 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 OR5AL1P0C617 328 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 SSTP61278 116 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 CST9LP1Q5W188 147 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 STOML3Q8TAV4 291 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 MAP1LC3BQ9GZQ8 125 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 ALG5Q9Y673 324 aa10.64□□□□□ -0.71
POLR2J3-208ENST00000504101 GZMBP10144 247 aa10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 FHITP49789 147 aa10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 RAB5CP51148 216 aa10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 INO80EQ8NBZ0 244 aaPredicted RBP10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 AP1S3Q96PC3 154 aa10.63□□□□□ -0.71
POLR2J3-208ENST00000504101 IGLV4-60A0A075B6I1 120 aa10.62□□□□□ -0.71
POLR2J3-208ENST00000504101 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
POLR2J3-208ENST00000504101 Q5BKY6 102 aa10.62□□□□□ -0.71
POLR2J3-208ENST00000504101 WDR73Q6P4I2 378 aa10.62□□□□□ -0.71
POLR2J3-208ENST00000504101 GFRA4Q9GZZ7 299 aa10.62□□□□□ -0.71
POLR2J3-208ENST00000504101 A0A1B0GUV1 79 aa10.61□□□□□ -0.71
POLR2J3-208ENST00000504101 COX6A2Q02221 97 aa10.61□□□□□ -0.71
POLR2J3-208ENST00000504101 TMEM243Q9BU79 118 aa10.61□□□□□ -0.71
POLR2J3-208ENST00000504101 A0A0J9YXV3 536 aa10.6□□□□□ -0.71
POLR2J3-208ENST00000504101 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
POLR2J3-208ENST00000504101 IGKV2-24A0A0C4DH68 120 aa10.59□□□□□ -0.71
POLR2J3-208ENST00000504101 M0QY20 66 aa10.59□□□□□ -0.71
POLR2J3-208ENST00000504101 MGPP08493 103 aa10.59□□□□□ -0.71
POLR2J3-208ENST00000504101 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
POLR2J3-208ENST00000504101 MED28Q9H204 178 aa10.59□□□□□ -0.71
POLR2J3-208ENST00000504101 FXYD6-FXYD2A0A087WZ82 144 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 H7C1H1 209 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 PAGE4O60829 102 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 NDUFS6O75380 124 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 S100A9P06702 114 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 SULT1A2P50226 295 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 PRSS3P2Q8NHM4 247 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 MLST8Q9BVC4 326 aa10.58□□□□□ -0.72
POLR2J3-208ENST00000504101 SCO2A0A1W2PP80 73 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 UBE2L6O14933 153 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 NKX2-5P52952 324 aaPredicted RBP10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 SUMO4Q6EEV6 95 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 CFAP161Q6P656 301 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 STPG4Q8N801 248 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 LYPD6BQ8NI32 183 aa10.57□□□□□ -0.72
POLR2J3-208ENST00000504101 GAGE12HA6NDE8 117 aa10.56□□□□□ -0.72
POLR2J3-208ENST00000504101 GIPP09681 153 aaPredicted RBP10.56□□□□□ -0.72
POLR2J3-208ENST00000504101 KRTAP10-8P60410 259 aa10.56□□□□□ -0.72
POLR2J3-208ENST00000504101 HIGD2BQ4VC39 106 aa10.56□□□□□ -0.72
POLR2J3-208ENST00000504101 REG3GQ6UW15 175 aa10.56□□□□□ -0.72
POLR2J3-208ENST00000504101 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
POLR2J3-208ENST00000504101 SPINK6Q6UWN8 80 aa10.55□□□□□ -0.72
POLR2J3-208ENST00000504101 PGLYRP4Q96LB8 373 aa10.55□□□□□ -0.72
POLR2J3-208ENST00000504101 TPPP3Q9BW30 176 aa10.55□□□□□ -0.72
POLR2J3-208ENST00000504101 IGKV3OR2-268A0A0C4DH90 116 aa10.53□□□□□ -0.72
POLR2J3-208ENST00000504101 PFDN1O60925 122 aa10.53□□□□□ -0.72
POLR2J3-208ENST00000504101 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
POLR2J3-208ENST00000504101 A0A096LNI7 61 aa10.52□□□□□ -0.73
POLR2J3-208ENST00000504101 AMTP48728 403 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms