RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
NFKB1-204ENST00000504044 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
NFKB1-204ENST00000504044 DNAJC30Q96LL9 226 aa12.06□□□□□ -0.48
NFKB1-204ENST00000504044 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
NFKB1-204ENST00000504044 Q9UF83 564 aa12.06□□□□□ -0.48
NFKB1-204ENST00000504044 NIT1Q86X76 327 aa12.05□□□□□ -0.48
NFKB1-204ENST00000504044 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
NFKB1-204ENST00000504044 SMIM7Q9BQ49 75 aa12.05□□□□□ -0.48
NFKB1-204ENST00000504044 TRBV6-8A0A0A6YYG3 113 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 TMEM262E9PQX1 116 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
NFKB1-204ENST00000504044 NTF3P20783 257 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 CTRLP40313 264 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 FAM231DQ6ZW35 169 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 BORCS7Q96B45 105 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 RNASE7Q9H1E1 156 aaKnown RBP12.04□□□□□ -0.48
NFKB1-204ENST00000504044 KIF25-AS1Q9Y6Z4 181 aa12.04□□□□□ -0.48
NFKB1-204ENST00000504044 A8MWL6 223 aa12.03□□□□□ -0.48
NFKB1-204ENST00000504044 K7EN84 100 aa12.03□□□□□ -0.48
NFKB1-204ENST00000504044 TWIST1Q15672 202 aa12.03□□□□□ -0.48
NFKB1-204ENST00000504044 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
NFKB1-204ENST00000504044 Q0VG73 95 aa12.02□□□□□ -0.49
NFKB1-204ENST00000504044 CT83Q5H943 113 aa12.02□□□□□ -0.49
NFKB1-204ENST00000504044 NTN5Q8WTR8 489 aaPredicted RBP12.02□□□□□ -0.49
NFKB1-204ENST00000504044 CHCHD5Q9BSY4 110 aa12.02□□□□□ -0.49
NFKB1-204ENST00000504044 CNFNQ9BYD5 112 aa12.02□□□□□ -0.49
NFKB1-204ENST00000504044 TRBV25-1A0A075B6N4 114 aa12.01□□□□□ -0.49
NFKB1-204ENST00000504044 CRPP02741 224 aa12.01□□□□□ -0.49
NFKB1-204ENST00000504044 M0QY20 66 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 FAM74A3Q4VXF1 159 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 SUMO4Q6EEV6 95 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 RASL11AQ6T310 242 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 FRZBQ92765 325 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 KLK12Q9UKR0 248 aa12□□□□□ -0.49
NFKB1-204ENST00000504044 C15orf54Q8N8G6 183 aa11.99□□□□□ -0.49
NFKB1-204ENST00000504044 IGHV1-24A0A0C4DH33 117 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 SRP19P09132 144 aaKnown RBP11.98□□□□□ -0.49
NFKB1-204ENST00000504044 PEA15Q15121 130 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 TEX261Q6UWH6 196 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 LINC01551Q86U37 167 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 SMDT1Q9H4I9 107 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 NIT2Q9NQR4 276 aa11.98□□□□□ -0.49
NFKB1-204ENST00000504044 IGKV2D-24A0A075B6R9 120 aa11.97□□□□□ -0.49
NFKB1-204ENST00000504044 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
NFKB1-204ENST00000504044 Q8N3U1 123 aa11.97□□□□□ -0.49
NFKB1-204ENST00000504044 Q8N814 137 aa11.97□□□□□ -0.49
NFKB1-204ENST00000504044 GFRA4Q9GZZ7 299 aa11.97□□□□□ -0.49
NFKB1-204ENST00000504044 LRCOL1A6NCL2 159 aa11.96□□□□□ -0.49
NFKB1-204ENST00000504044 FAM231BA6NCW3 169 aa11.96□□□□□ -0.49
NFKB1-204ENST00000504044 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
NFKB1-204ENST00000504044 GCSHP23434 173 aa11.96□□□□□ -0.49
NFKB1-204ENST00000504044 OSTCQ9NRP0 149 aa11.96□□□□□ -0.49
NFKB1-204ENST00000504044 PKHD1P08F94 4074 aa11.96□□□□□ -0.5
NFKB1-204ENST00000504044 FOXA3P55318 350 aaPredicted RBP11.95□□□□□ -0.5
NFKB1-204ENST00000504044 IQCJQ1A5X6 159 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 TMEM241Q24JQ0 296 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 TSKUQ8WUA8 353 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 GTSF1Q8WW33 167 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 PGLYRP4Q96LB8 373 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 C1orf43Q9BWL3 253 aa11.95□□□□□ -0.5
NFKB1-204ENST00000504044 PKD1P98161 4303 aa11.94□□□□□ -0.5
NFKB1-204ENST00000504044 MAPKAPK5-AS1Q8N8E1 139 aa11.94□□□□□ -0.5
NFKB1-204ENST00000504044 UBE2L6O14933 153 aa11.93□□□□□ -0.5
NFKB1-204ENST00000504044 COTL1Q14019 142 aa11.93□□□□□ -0.5
NFKB1-204ENST00000504044 MPV17L2Q567V2 206 aa11.93□□□□□ -0.5
NFKB1-204ENST00000504044 TMEM243Q9BU79 118 aa11.93□□□□□ -0.5
NFKB1-204ENST00000504044 DNAH11Q96DT5 4516 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 KIAA1109Q2LD37 5005 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 A0A1B0GUT8 65 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 HIGD1CA8MV81 97 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 MIAQ16674 131 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 C14orf177Q52M58 125 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 Q8N976 141 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 NAT8Q9UHE5 227 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 HERC2O95714 4834 aa11.92□□□□□ -0.5
NFKB1-204ENST00000504044 RAB14P61106 215 aa11.91□□□□□ -0.5
NFKB1-204ENST00000504044 GAGE6Q13070 117 aa11.91□□□□□ -0.5
NFKB1-204ENST00000504044 ATRAIDQ6UW56 229 aa11.91□□□□□ -0.5
NFKB1-204ENST00000504044 NTM-AS1Q6ZSK4 140 aa11.91□□□□□ -0.5
NFKB1-204ENST00000504044 AMTP48728 403 aa11.9□□□□□ -0.5
NFKB1-204ENST00000504044 RIGQ13278 110 aa11.9□□□□□ -0.5
NFKB1-204ENST00000504044 ADIRFQ15847 76 aa11.9□□□□□ -0.5
NFKB1-204ENST00000504044 RBX1P62877 108 aa11.89□□□□□ -0.51
NFKB1-204ENST00000504044 GATD1Q8NB37 220 aa11.89□□□□□ -0.51
NFKB1-204ENST00000504044 ISOC2Q96AB3 205 aa11.89□□□□□ -0.51
NFKB1-204ENST00000504044 TRAV26-2A0A0B4J265 109 aa11.88□□□□□ -0.51
NFKB1-204ENST00000504044 NCR2O95944 276 aa11.88□□□□□ -0.51
NFKB1-204ENST00000504044 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
NFKB1-204ENST00000504044 RPL23P62829 140 aaKnown RBP11.88□□□□□ -0.51
NFKB1-204ENST00000504044 BAALCQ8WXS3 180 aa11.88□□□□□ -0.51
NFKB1-204ENST00000504044 TMEM191AQ9H0A3 160 aa11.88□□□□□ -0.51
NFKB1-204ENST00000504044 NAT8BQ9UHF3 227 aa11.88□□□□□ -0.51
NFKB1-204ENST00000504044 DYNC1H1Q14204 4646 aaKnown RBP11.88□□□□□ -0.51
NFKB1-204ENST00000504044 A0A1B0GUV1 79 aa11.87□□□□□ -0.51
NFKB1-204ENST00000504044 ENHOQ6UWT2 76 aa11.87□□□□□ -0.51
NFKB1-204ENST00000504044 Q8N1X5 172 aa11.87□□□□□ -0.51
NFKB1-204ENST00000504044 LECT2O14960 151 aa11.86□□□□□ -0.51
NFKB1-204ENST00000504044 PPP1R17O96001 155 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms