RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SMIM15Q7Z3B0 74 aa11.3□□□□□ -0.6
SCLT1-205ENST00000503401 RPL36ALQ969Q0 106 aaKnown RBP11.3□□□□□ -0.6
SCLT1-205ENST00000503401 TRBV7-3A0A075B6L6 115 aa11.29□□□□□ -0.6
SCLT1-205ENST00000503401 MT-ND4LP03901 98 aa11.29□□□□□ -0.6
SCLT1-205ENST00000503401 WFDC10BQ8IUB3 73 aa11.29□□□□□ -0.6
SCLT1-205ENST00000503401 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
SCLT1-205ENST00000503401 C7orf77A4D0Y5 90 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 PPP1R2P9O14990 202 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 UBE2D3P61077 147 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 UBE2D2P62837 147 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 RIGQ13278 110 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 RHEBQ15382 184 aa11.28□□□□□ -0.6
SCLT1-205ENST00000503401 A0A087WWC5 75 aa11.27□□□□□ -0.6
SCLT1-205ENST00000503401 IGHV3-38A0A0C4DH36 116 aa11.27□□□□□ -0.6
SCLT1-205ENST00000503401 SIVA1O15304 175 aa11.27□□□□□ -0.6
SCLT1-205ENST00000503401 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.6
SCLT1-205ENST00000503401 NBDYA0A0U1RRE5 68 aa11.27□□□□□ -0.61
SCLT1-205ENST00000503401 TIRAPP58753 221 aa11.27□□□□□ -0.61
SCLT1-205ENST00000503401 OR10J3Q5JRS4 329 aa11.27□□□□□ -0.61
SCLT1-205ENST00000503401 MRPL54Q6P161 138 aaKnown RBP11.27□□□□□ -0.61
SCLT1-205ENST00000503401 GATD1Q8NB37 220 aa11.27□□□□□ -0.61
SCLT1-205ENST00000503401 H7C1H1 209 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 CAMPP49913 170 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 RASL11AQ6T310 242 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 Q6ZR54 194 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 KRTAP1-5Q9BYS1 174 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 TMEM191AQ9H0A3 160 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 TMEM242Q9NWH2 141 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 DNAH17Q9UFH2 4485 aa11.26□□□□□ -0.61
SCLT1-205ENST00000503401 FAT2Q9NYQ8 4349 aa11.25□□□□□ -0.61
SCLT1-205ENST00000503401 LELP1Q5T871 98 aa11.25□□□□□ -0.61
SCLT1-205ENST00000503401 AMN1Q8IY45 258 aa11.25□□□□□ -0.61
SCLT1-205ENST00000503401 TNFRSF18Q9Y5U5 241 aa11.25□□□□□ -0.61
SCLT1-205ENST00000503401 RPL39LQ96EH5 51 aaKnown RBP11.24□□□□□ -0.61
SCLT1-205ENST00000503401 RNF185Q96GF1 192 aa11.24□□□□□ -0.61
SCLT1-205ENST00000503401 GAS8-AS1O95177 125 aa11.24□□□□□ -0.61
SCLT1-205ENST00000503401 DEFB104AQ8WTQ1 72 aa11.24□□□□□ -0.61
SCLT1-205ENST00000503401 TRAV8-6A0A0B4J262 113 aa11.23□□□□□ -0.61
SCLT1-205ENST00000503401 RAB4AP20338 218 aa11.23□□□□□ -0.61
SCLT1-205ENST00000503401 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
SCLT1-205ENST00000503401 RPS10P5Q9NQ39 176 aa11.23□□□□□ -0.61
SCLT1-205ENST00000503401 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
SCLT1-205ENST00000503401 A0A1B0GXF2 115 aa11.22□□□□□ -0.61
SCLT1-205ENST00000503401 SCO1O75880 301 aa11.22□□□□□ -0.61
SCLT1-205ENST00000503401 HBBP68871 147 aa11.22□□□□□ -0.61
SCLT1-205ENST00000503401 Q8N3U1 123 aa11.22□□□□□ -0.61
SCLT1-205ENST00000503401 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
SCLT1-205ENST00000503401 DAZ4Q86SG3 579 aaKnown RBP11.21□□□□□ -0.61
SCLT1-205ENST00000503401 DAZ3Q9NR90 486 aaKnown RBP11.21□□□□□ -0.61
SCLT1-205ENST00000503401 SMKR1H3BMG3 65 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 NCR2O95944 276 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 DNAH10OSP0CZ25 163 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 A0A1B0GW15 77 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 IGHV3-30P01768 117 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 IGHV3-33P01772 117 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 IGHV3-30-3P0DP02 117 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 IGHV3-30-5P0DP03 117 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 RPS10P46783 165 aaKnown RBP11.2□□□□□ -0.62
SCLT1-205ENST00000503401 TTC32Q5I0X7 151 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 FAM104BQ5XKR9 115 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 NTM-AS1Q6ZSK4 140 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 YPEL4Q96NS1 127 aa11.2□□□□□ -0.62
SCLT1-205ENST00000503401 TRBV6-8A0A0A6YYG3 113 aa11.19□□□□□ -0.62
SCLT1-205ENST00000503401 ATP5L2Q7Z4Y8 100 aa11.19□□□□□ -0.62
SCLT1-205ENST00000503401 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.19□□□□□ -0.62
SCLT1-205ENST00000503401 MRPL51Q4U2R6 128 aaKnown RBP11.18□□□□□ -0.62
SCLT1-205ENST00000503401 LINC01556Q5JQF7 62 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 C1orf134Q5TEV5 83 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 CBLN2Q8IUK8 224 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 IMMP2LQ96T52 175 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 SMCO4Q9NRQ5 59 aa11.18□□□□□ -0.62
SCLT1-205ENST00000503401 EPPK1P58107 5090 aaKnown RBP11.17□□□□□ -0.62
SCLT1-205ENST00000503401 RTL8CO15255 209 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 S100A8P05109 93 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 FRZBQ92765 325 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 URGCP-MRPS24S4R325 110 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 C6orf223Q8N319 242 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 BTF3L4Q96K17 158 aa11.17□□□□□ -0.62
SCLT1-205ENST00000503401 SDHAF1A6NFY7 115 aa11.16□□□□□ -0.62
SCLT1-205ENST00000503401 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
SCLT1-205ENST00000503401 NIT1Q86X76 327 aa11.16□□□□□ -0.62
SCLT1-205ENST00000503401 TRAV9-2A0A087WT02 112 aa11.15□□□□□ -0.62
SCLT1-205ENST00000503401 NRACQ8N912 160 aa11.15□□□□□ -0.62
SCLT1-205ENST00000503401 CHCHD5Q9BSY4 110 aa11.15□□□□□ -0.62
SCLT1-205ENST00000503401 ST20Q9HBF5 79 aa11.15□□□□□ -0.62
SCLT1-205ENST00000503401 PKD1P98161 4303 aa11.15□□□□□ -0.63
SCLT1-205ENST00000503401 DNAH11Q96DT5 4516 aa11.14□□□□□ -0.63
SCLT1-205ENST00000503401 TRBV25-1A0A075B6N4 114 aa11.14□□□□□ -0.63
SCLT1-205ENST00000503401 TMEM262E9PQX1 116 aa11.14□□□□□ -0.63
SCLT1-205ENST00000503401 CKS2P33552 79 aa11.14□□□□□ -0.63
SCLT1-205ENST00000503401 TRBV6-5A0A0K0K1A5 114 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 D6R8Y8 96 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 COTL1Q14019 142 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 ELOBQ15370 118 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 TMEM97Q5BJF2 176 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 HECTD4Q9Y4D8 3996 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 IGHV1-24A0A0C4DH33 117 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 S100PP25815 95 aa11.13□□□□□ -0.63
SCLT1-205ENST00000503401 GAGE6Q13070 117 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms